RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 EML3Q32P44 896 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 XKR4Q5GH76 650 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 FRMD7Q6ZUT3 714 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 LIMS2Q7Z4I7 341 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 TMEM135Q86UB9 458 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 FAM136AQ96C01 138 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 VPS39Q96JC1 886 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 NUDT5Q9UKK9 219 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 C17orf102A2RUQ5 167 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 MT-CYBP00156 380 aaPredicted RBP17.75■□□□□ 0.43
COL9A1-201ENST00000320755 BDNFP23560 247 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 PPIDQ08752 370 aaKnown RBP17.75■□□□□ 0.43
COL9A1-201ENST00000320755 NAB1Q13506 487 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 GRM3Q14832 879 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 POU6F1Q14863 301 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 INSCQ1MX18 579 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 MYLK4Q86YV6 388 aaPredicted RBP17.75■□□□□ 0.43
COL9A1-201ENST00000320755 HPS6Q86YV9 775 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 PPP1R10Q96QC0 940 aaKnown RBP17.75■□□□□ 0.43
COL9A1-201ENST00000320755 OR52B2Q96RD2 323 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 ATXN3LQ9H3M9 355 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 ZNF195O14628 629 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 GABRDO14764 452 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 LIN7AO14910 233 aaPredicted RBP17.75■□□□□ 0.43
COL9A1-201ENST00000320755 ZBTB14O43829 449 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 ZCCHC18P0CG32 403 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 CDK18Q07002 472 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 ZNF460Q14592 562 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 CCDC153Q494R4 210 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 TDRD5Q8NAT2 981 aaKnown RBP17.75■□□□□ 0.43
COL9A1-201ENST00000320755 EPAS1Q99814 870 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 CASS4Q9NQ75 786 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 G3V2L1 256 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 MAP3K13O43283 966 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 SCNN1GP51170 649 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 ITGA7Q13683 1181 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 USP10Q14694 798 aaKnown RBP17.75■□□□□ 0.43
COL9A1-201ENST00000320755 RNF220Q5VTB9 566 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 BNIPLQ7Z465 357 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 IPMKQ8NFU5 416 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 GATA5Q9BWX5 397 aaPredicted RBP17.75■□□□□ 0.43
COL9A1-201ENST00000320755 AP5M1Q9H0R1 490 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 GBA3Q9H227 469 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 TLK1Q9UKI8 766 aa17.75■□□□□ 0.43
COL9A1-201ENST00000320755 TRIM13O60858 407 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 MPSTP25325 297 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 SERPINB6P35237 376 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 ADAM17P78536 824 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 CTBP1Q13363 440 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 PCBP1Q15365 356 aaKnown RBP eCLIP17.74■□□□□ 0.43
COL9A1-201ENST00000320755 SORCS3Q9UPU3 1222 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 AIM2O14862 343 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 THP07101 528 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 HARS2P49590 506 aaKnown RBP17.74■□□□□ 0.43
COL9A1-201ENST00000320755 NUMBP49757 651 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 SEMA3BQ13214 749 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 IRGCQ6NXR0 463 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 C1orf21Q9H246 121 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 CNGB3Q9NQW8 809 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 SCOCQ9UIL1 159 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 PCDHB12Q9Y5F1 795 aa17.74■□□□□ 0.43
COL9A1-201ENST00000320755 FBXO21O94952 628 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 EPHA3P29320 983 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 MSX2P35548 267 aaPredicted RBP17.73■□□□□ 0.43
COL9A1-201ENST00000320755 ASPHQ12797 758 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 NXNQ6DKJ4 435 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 TAC4Q86UU9 113 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 SCAMP5Q8TAC9 235 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 CMTM5Q96DZ9 223 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 SGF29Q96ES7 293 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 PARK7Q99497 189 aaKnown RBP17.73■□□□□ 0.43
COL9A1-201ENST00000320755 SIKE1Q9BRV8 207 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 CDH19Q9H159 772 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 DNAJC28Q9NX36 388 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 ST3GAL5Q9UNP4 418 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 CDY2AQ9Y6F7 541 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 CDY1Q9Y6F8 540 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 SF3B1O75533 1304 aaKnown RBP eCLIP17.73■□□□□ 0.43
COL9A1-201ENST00000320755 SP100P23497 879 aaPredicted RBP17.73■□□□□ 0.43
COL9A1-201ENST00000320755 LRPAP1P30533 357 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 NAGLUP54802 743 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 LPCAT4Q643R3 524 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 KCTD11Q693B1 232 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 ITPRIPL1Q6GPH6 555 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 DENND6AQ8IWF6 608 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 CNTD1Q8N815 330 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 SLC9A7Q96T83 725 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 VCXQ9H320 206 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 RUVBL2Q9Y230 463 aaKnown RBP17.73■□□□□ 0.43
COL9A1-201ENST00000320755 VAPBO95292 243 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 POMCP01189 267 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 FAM110CQ1W6H9 321 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 PNPLA1Q8N8W4 532 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 KCTD4Q8WVF5 259 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 NTAN1Q96AB6 310 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 MARK4Q96L34 752 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 TEKT5Q96M29 485 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 LENG8Q96PV6 779 aaPredicted RBP17.73■□□□□ 0.43
COL9A1-201ENST00000320755 OMDQ99983 421 aa17.73■□□□□ 0.43
COL9A1-201ENST00000320755 FTHL17Q9BXU8 183 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms