RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 CDK5RAP1Q96SZ6 601 aaKnown RBP13.64□□□□□ -0.23
SYCN-201ENST00000318438 GEMIN8Q9NWZ8 242 aaKnown RBP13.64□□□□□ -0.23
SYCN-201ENST00000318438 NLGN3Q9NZ94 848 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 CLIC5Q9NZA1 410 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 CYTH4Q9UIA0 394 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 RWDD2AQ9UIY3 292 aa13.64□□□□□ -0.23
SYCN-201ENST00000318438 TPX2Q9ULW0 747 aaKnown RBP13.64□□□□□ -0.23
SYCN-201ENST00000318438 CPED1A4D0V7 1026 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 TTC34A8MYJ7 566 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 K7ESM1 405 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 ITGA2BP08514 1039 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 TBXAS1P24557 533 aaPredicted RBP13.63□□□□□ -0.23
SYCN-201ENST00000318438 SLC5A2P31639 672 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 METAP1P53582 386 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 ST8SIA6P61647 398 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 YWHAEP62258 255 aaKnown RBP13.63□□□□□ -0.23
SYCN-201ENST00000318438 KCNMA1Q12791 1236 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 CETN1Q12798 172 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 GUSBP11Q6P575 273 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.63□□□□□ -0.23
SYCN-201ENST00000318438 MLKLQ8NB16 471 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 ZNF564Q8TBZ8 553 aaPredicted RBP13.63□□□□□ -0.23
SYCN-201ENST00000318438 TATDN2Q93075 761 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 GRAMD1AQ96CP6 724 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 TMA16Q96EY4 203 aaKnown RBP13.63□□□□□ -0.23
SYCN-201ENST00000318438 KLHDC7BQ96G42 594 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 MRGPRX3Q96LB0 322 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 GBP4Q96PP9 640 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 FAM129BQ96TA1 746 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 MYOCQ99972 504 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 SRRTQ9BXP5 876 aaKnown RBP13.63□□□□□ -0.23
SYCN-201ENST00000318438 NUP62CLQ9H1M0 184 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 LMBRD1Q9NUN5 540 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 KLHL11Q9NVR0 708 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 PLEKHB1Q9UF11 243 aaPredicted RBP13.63□□□□□ -0.23
SYCN-201ENST00000318438 STRIP2Q9ULQ0 834 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 PCDHGA4Q9Y5G9 962 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 USP3Q9Y6I4 520 aa13.63□□□□□ -0.23
SYCN-201ENST00000318438 ICE1Q9Y2F5 2266 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 RTN2O75298 545 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 WT1P19544 449 aaPredicted RBP13.62□□□□□ -0.23
SYCN-201ENST00000318438 DRD3P35462 400 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 MLLT3P42568 568 aaPredicted RBP13.62□□□□□ -0.23
SYCN-201ENST00000318438 RAD23BP54727 409 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 ZNF394Q53GI3 561 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 RSRC2Q7L4I2 434 aaKnown RBP13.62□□□□□ -0.23
SYCN-201ENST00000318438 EFL1Q7Z2Z2 1120 aaKnown RBP13.62□□□□□ -0.23
SYCN-201ENST00000318438 VASH2Q86V25 355 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 STK40Q8N2I9 435 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 SLC4A11Q8NBS3 891 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 HTR3CQ8WXA8 447 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 PLD4Q96BZ4 506 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 LIN37Q96GY3 246 aaPredicted RBP13.62□□□□□ -0.23
SYCN-201ENST00000318438 DUSP16Q9BY84 665 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 USP29Q9HBJ7 922 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 DMTF1Q9Y222 760 aa13.62□□□□□ -0.23
SYCN-201ENST00000318438 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.62□□□□□ -0.23
SYCN-201ENST00000318438 KIF26BQ2KJY2 2108 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 CCDC187A0A096LP49 1063 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.61□□□□□ -0.23
SYCN-201ENST00000318438 ADH1BP00325 375 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 C5AR1P21730 350 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 CSKP41240 450 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 CTSOP43234 321 aaPredicted RBP13.61□□□□□ -0.23
SYCN-201ENST00000318438 HARS2P49590 506 aaKnown RBP13.61□□□□□ -0.23
SYCN-201ENST00000318438 PDX1P52945 283 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 ZNF177Q13360 481 aaPredicted RBP13.61□□□□□ -0.23
SYCN-201ENST00000318438 DRAP1Q14919 205 aaPredicted RBP13.61□□□□□ -0.23
SYCN-201ENST00000318438 TRIP4Q15650 581 aaPredicted RBP13.61□□□□□ -0.23
SYCN-201ENST00000318438 ZNF542PQ5EBM4 170 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 PPP1R26Q5T8A7 1209 aaPredicted RBP13.61□□□□□ -0.23
SYCN-201ENST00000318438 ARHGAP17Q68EM7 881 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 C14orf80Q86SX3 495 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 JAMLQ86YT9 394 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 TTC17Q96AE7 1141 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 HEXIM2Q96MH2 286 aaKnown RBP13.61□□□□□ -0.23
SYCN-201ENST00000318438 NT5C1BQ96P26 610 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
SYCN-201ENST00000318438 FUCA2Q9BTY2 467 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 CALN1Q9BXU9 219 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 EVA1BQ9NVM1 165 aa13.61□□□□□ -0.23
SYCN-201ENST00000318438 INTS6Q9UL03 887 aaKnown RBP13.61□□□□□ -0.23
SYCN-201ENST00000318438 CELSR2Q9HCU4 2923 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 C2CD3Q4AC94 2353 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 PRAMEF26H0Y7S4 382 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 SCAMP1O15126 338 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 TBL1XO60907 577 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 IL1BP01584 269 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 MZF1P28698 734 aaPredicted RBP13.6□□□□□ -0.23
SYCN-201ENST00000318438 CASRP41180 1078 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 LRMPQ12912 555 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 NCAPHQ15003 741 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 PERM1Q5SV97 790 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 RFWD3Q6PCD5 774 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 UBR7Q8N806 425 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 LMO3Q8TAP4 145 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 LMLNQ96KR4 655 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 MED15Q96RN5 788 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 PLAAQ9Y263 795 aa13.6□□□□□ -0.23
SYCN-201ENST00000318438 CSMD1Q96PZ7 3565 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms