RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 BAZ2AQ9UIF9 1905 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ADGRA2Q96PE1 1338 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TCRBV3S1A0A5B6 114 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TCAF2A6NFQ2 919 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 MRASO14807 208 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 STBD1O95210 358 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ZBTB11O95625 1053 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 STAU1O95793 577 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 OATP04181 439 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ALDH2P05091 517 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 PKNOX1P55347 436 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 IFRD2Q12894 506 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 PRKG1Q13976 671 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 BTG3Q14201 252 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 DPYSL2Q16555 572 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF781Q8N8C0 355 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 SNX31Q8N9S9 440 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 CLEC4DQ8WXI8 215 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF347Q96SE7 839 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TMEM165Q9HC07 324 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 SPATA7Q9P0W8 599 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 A0A1B0GUL6 1792 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 NUP98P52948 1817 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 WDR27A2RRH5 827 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 PSMD3O43242 534 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 GPIP06744 558 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 GYS1P13807 737 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 CAP2P40123 477 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 SERPINB10P48595 397 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 MS4A2Q01362 244 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TGFBIQ15582 683 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 NHSL2Q5HYW2 709 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ZYG11AQ6WRX3 759 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 FASTKD5Q7L8L6 764 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 CYP2U1Q7Z449 544 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 NT5DC4Q86YG4 428 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 CENPSQ8N2Z9 138 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 DCLK2Q8N568 766 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TSPEARQ8WU66 669 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 MAELQ96JY0 434 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 OR52B2Q96RD2 323 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 RANBP9Q96S59 729 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 FTHL17Q9BXU8 183 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 BCO2Q9BYV7 579 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 WDR12Q9GZL7 423 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 RAD21L1Q9H4I0 556 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 RMI1Q9H9A7 625 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 POLR1BQ9H9Y6 1135 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 PLAC1Q9HBJ0 212 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 NHSQ6T4R5 1651 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 AKAP10O43572 662 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 METTL18O95568 372 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 NTRK1P04629 796 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 MYF6P23409 242 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 CYP2F1P24903 491 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 GNL1P36915 607 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 PCYT1AP49585 367 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 NDST2P52849 883 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 NAGLUP54802 743 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 PRAMEP78395 509 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ANO4Q32M45 955 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TBC1D10BQ4KMP7 808 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 COQ5Q5HYK3 327 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 CES4AQ5XG92 561 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ABHD15Q6UXT9 468 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 CHSY3Q70JA7 882 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 STYXQ8WUJ0 223 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 C17orf50Q8WW18 174 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 S100ZQ8WXG8 99 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF669Q96BR6 464 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TMA16Q96EY4 203 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 DCUN1D5Q9BTE7 237 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 RHOJQ9H4E5 214 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 EML4Q9HC35 981 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF302Q9NR11 478 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 CLDN25C9JDP6 229 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ACKR2O00590 384 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 FAM163BP0C2L3 166 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 HOXB8P17481 243 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ATP5F1P24539 256 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 EPHA3P29320 983 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 SLC6A3Q01959 620 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 GALNT1Q10472 559 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ARL13AQ5H913 290 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 VWA5B1Q5TIE3 1220 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TTC23Q5W5X9 447 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TMEM53Q6P2H8 277 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 KIAA0319LQ8IZA0 1049 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 OR2T34Q8NGX1 318 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 OR2T3Q8NH03 318 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 VPS39Q96JC1 886 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 MTMR12Q9C0I1 747 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 DHX35Q9H5Z1 703 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TDRD3Q9H7E2 651 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 PXMP2Q9NR77 195 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 CCM2LQ9NUG4 571 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 COL20A1Q9P218 1284 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TSC22D4Q9Y3Q8 395 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF541Q9H0D2 1346 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms