RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 B4GALNT2Q8NHY0 566 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 IFT43Q96FT9 208 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 PRPF18Q99633 342 aaKnown RBP15.18■□□□□ 0.02
TFE3-201ENST00000315869 CPNE1Q99829 537 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 Q9H521 79 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 DPYSL4O14531 572 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 CLPTM1O96005 669 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 MAGEA3P43357 314 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 TPI1P60174 286 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 SPNS2Q8IVW8 549 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 PQLC1Q8N2U9 271 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 PARK7Q99497 189 aaKnown RBP15.18■□□□□ 0.02
TFE3-201ENST00000315869 EIF2AQ9BY44 585 aaKnown RBP15.18■□□□□ 0.02
TFE3-201ENST00000315869 DMAP1Q9NPF5 467 aaPredicted RBP15.18■□□□□ 0.02
TFE3-201ENST00000315869 RUVBL2Q9Y230 463 aaKnown RBP15.18■□□□□ 0.02
TFE3-201ENST00000315869 NUP205Q92621 2012 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 TSPAN1O60635 241 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 JCHAINP01591 159 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 MYL3P08590 195 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 THRAP10827 490 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 XRCC1P18887 633 aaPredicted RBP15.18■□□□□ 0.02
TFE3-201ENST00000315869 THOP1P52888 689 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 NIPAL4Q0D2K0 466 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 CYLC2Q14093 348 aaPredicted RBP15.18■□□□□ 0.02
TFE3-201ENST00000315869 GRTP1Q5TC63 336 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 OLFML2BQ68BL8 750 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 KCNMB4Q86W47 210 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 SNX31Q8N9S9 440 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 ACVR1CQ8NER5 493 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 BHLHE22Q8NFJ8 381 aaPredicted RBP15.18■□□□□ 0.02
TFE3-201ENST00000315869 DCUN1D1Q96GG9 259 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 NAT9Q9BTE0 207 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 SIK2Q9H0K1 926 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 SEMA6AQ9H2E6 1030 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 DNAJC28Q9NX36 388 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 CACNG4Q9UBN1 327 aa15.18■□□□□ 0.02
TFE3-201ENST00000315869 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.17■□□□□ 0.02
TFE3-201ENST00000315869 ZNF460Q14592 562 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 ANKRD20A4Q4UJ75 823 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 RWDD4Q6NW29 188 aaKnown RBP15.17■□□□□ 0.02
TFE3-201ENST00000315869 SLC26A9Q7LBE3 791 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 KCTD4Q8WVF5 259 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 SIKE1Q9BRV8 207 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 ACE2Q9BYF1 805 aaPredicted RBP15.17■□□□□ 0.02
TFE3-201ENST00000315869 NXF3Q9H4D5 531 aaKnown RBP15.17■□□□□ 0.02
TFE3-201ENST00000315869 PCDHB12Q9Y5F1 795 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 SNX10Q9Y5X0 201 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 ATP5BP06576 529 aaKnown RBP15.17■□□□□ 0.02
TFE3-201ENST00000315869 SETSIPP0DME0 302 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 MAGEA6P43360 314 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 GRIA4P48058 902 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 SEPT6Q14141 434 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 NRF1Q16656 503 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 C11orf91Q3C1V1 193 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 CCDC153Q494R4 210 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 DSELQ8IZU8 1212 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 PCDH20Q8N6Y1 951 aaKnown RBP15.17■□□□□ 0.02
TFE3-201ENST00000315869 ANKRD52Q8NB46 1076 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 PPWD1Q96BP3 646 aaKnown RBP15.17■□□□□ 0.02
TFE3-201ENST00000315869 VPS39Q96JC1 886 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 ARHGAP39Q9C0H5 1083 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 CYP4F12Q9HCS2 524 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 DDX43Q9NXZ2 648 aaKnown RBP15.17■□□□□ 0.02
TFE3-201ENST00000315869 DNAJB4Q9UDY4 337 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 HUS1O60921 280 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 CSPG5O95196 566 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 MMP3P08254 477 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 SRGAP2BP0DMP2 458 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 ERCC2P18074 760 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 FGFR3P22607 806 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 PTPN9P43378 593 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 NUMBP49757 651 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 RPS6KA3P51812 740 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 SLC5A9Q2M3M2 681 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 LSM12Q3MHD2 195 aaKnown RBP15.17■□□□□ 0.02
TFE3-201ENST00000315869 ARL13AQ5H913 290 aaPredicted RBP15.17■□□□□ 0.02
TFE3-201ENST00000315869 FBXO47Q5MNV8 452 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 SYPL2Q5VXT5 272 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 TMC7Q7Z402 723 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 NPAS2Q99743 824 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 IRAK4Q9NWZ3 460 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 STAP1Q9ULZ2 295 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 NME7Q9Y5B8 376 aa15.17■□□□□ 0.02
TFE3-201ENST00000315869 ZBTB24O43167 697 aaPredicted RBP15.16■□□□□ 0.02
TFE3-201ENST00000315869 RECQL4O94761 1208 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 SLC26A2P50443 739 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 C6orf52Q5T4I8 152 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 RBM44Q6ZP01 1051 aaKnown RBP15.16■□□□□ 0.02
TFE3-201ENST00000315869 APPL2Q8NEU8 664 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 CEP70Q8NHQ1 597 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 CXorf38Q8TB03 319 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 NAT14Q8WUY8 206 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 DNAJB3Q8WWF6 145 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 EDEM1Q92611 657 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 RBBP8Q99708 897 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 KATNBL1Q9H079 304 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 ATXN3LQ9H3M9 355 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 STN1Q9H668 368 aaKnown RBP15.16■□□□□ 0.02
TFE3-201ENST00000315869 MYL4P12829 197 aa15.16■□□□□ 0.02
TFE3-201ENST00000315869 MAP3K7CLP57077 242 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms