RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CTSLP07711 333 aa12.33□□□□□ -0.43
SCFD1-201ENST00000311943 MYBL1P10243 752 aa12.33□□□□□ -0.43
SCFD1-201ENST00000311943 TPMTP51580 245 aa12.33□□□□□ -0.43
SCFD1-201ENST00000311943 PLK1P53350 603 aa12.33□□□□□ -0.43
SCFD1-201ENST00000311943 RPS14P62263 151 aaKnown RBP12.33□□□□□ -0.43
SCFD1-201ENST00000311943 HNRNPA1L2Q32P51 320 aaKnown RBP12.33□□□□□ -0.43
SCFD1-201ENST00000311943 IL31Q6EBC2 164 aa12.33□□□□□ -0.43
SCFD1-201ENST00000311943 SLC41A1Q8IVJ1 513 aa12.33□□□□□ -0.43
SCFD1-201ENST00000311943 KIAA2013Q8IYS2 634 aa12.33□□□□□ -0.43
SCFD1-201ENST00000311943 KCNV2Q8TDN2 545 aa12.33□□□□□ -0.43
SCFD1-201ENST00000311943 ARHGEF2Q92974 986 aaKnown RBP12.33□□□□□ -0.43
SCFD1-201ENST00000311943 TM6SF2Q9BZW4 377 aa12.33□□□□□ -0.43
SCFD1-201ENST00000311943 CAAP1Q9H8G2 361 aa12.33□□□□□ -0.43
SCFD1-201ENST00000311943 ATP13A1Q9HD20 1204 aa12.33□□□□□ -0.43
SCFD1-201ENST00000311943 MRPL47Q9HD33 250 aaKnown RBP12.33□□□□□ -0.43
SCFD1-201ENST00000311943 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.33□□□□□ -0.43
SCFD1-201ENST00000311943 FAM186AA6NE01 2351 aa12.33□□□□□ -0.43
SCFD1-201ENST00000311943 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
SCFD1-201ENST00000311943 J3KR12 359 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 MID1O15344 667 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 TIMM44O43615 452 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 PRPSAP2O60256 369 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 GDF9O60383 454 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 RNF8O76064 485 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 TPM1P09493 284 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 RHOQP17081 205 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 ERCC2P18074 760 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 IL4RP24394 825 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 HOXD11P31277 338 aaPredicted RBP12.33□□□□□ -0.44
SCFD1-201ENST00000311943 SF3A2Q15428 464 aaKnown RBP12.33□□□□□ -0.44
SCFD1-201ENST00000311943 TTC39BQ5VTQ0 682 aaPredicted RBP12.33□□□□□ -0.44
SCFD1-201ENST00000311943 ZC3H14Q6PJT7 736 aaKnown RBP12.33□□□□□ -0.44
SCFD1-201ENST00000311943 B4GALNT4Q76KP1 1039 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 TRMT11Q7Z4G4 463 aaKnown RBP12.33□□□□□ -0.44
SCFD1-201ENST00000311943 CCDC117Q8IWD4 279 aaPredicted RBP12.33□□□□□ -0.44
SCFD1-201ENST00000311943 AADATQ8N5Z0 425 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 ATP11CQ8NB49 1132 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 FNIP1Q8TF40 1166 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 CTNNBL1Q8WYA6 563 aaPredicted RBP12.33□□□□□ -0.44
SCFD1-201ENST00000311943 SIPA1Q96FS4 1042 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 FAM126AQ9BYI3 521 aaPredicted RBP12.33□□□□□ -0.44
SCFD1-201ENST00000311943 SLC39A8Q9C0K1 460 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 TMEM248Q9NWD8 314 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 PPARGC1AQ9UBK2 798 aaKnown RBP12.33□□□□□ -0.44
SCFD1-201ENST00000311943 PAXBP1Q9Y5B6 917 aa12.33□□□□□ -0.44
SCFD1-201ENST00000311943 NYNRINQ9P2P1 1898 aaKnown RBP12.33□□□□□ -0.44
SCFD1-201ENST00000311943 SPAG17Q6Q759 2223 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 PIEZO1Q92508 2521 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 FAM47DPA6NHR8 397 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 TMEM253P0C7T8 217 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 ITPKAP23677 461 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 TPI1P60174 286 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 STARD3Q14849 445 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 TSR1Q2NL82 804 aaKnown RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 HSF5Q4G112 596 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 SETD3Q86TU7 594 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 SH2D3CQ8N5H7 860 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 RTL3Q8N8U3 475 aaKnown RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 OR2T3Q8NH03 318 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 TOE1Q96GM8 510 aaKnown RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 EXOC2Q96KP1 924 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 LACRTQ9GZZ8 138 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 DOCK9Q9BZ29 2069 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 A0A1W2PP55 124 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 MYO1FO00160 1098 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 EEF2KO00418 725 aaKnown RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 BUB1O43683 1085 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 ALDH1A2O94788 518 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 MOCS3O95396 460 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 PSMD8P48556 350 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 DHPSP49366 369 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 DNA2P51530 1060 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 ST8SIA6P61647 398 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 NRG1Q02297 640 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 CREB5Q02930 508 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 USP39Q53GS9 565 aaKnown RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 C6orf118Q5T5N4 469 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 ATXN7L2Q5T6C5 722 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 LAYNQ6UX15 382 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 RFX8Q6ZV50 586 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 ZNF354CQ86Y25 554 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 ARHGAP12Q8IWW6 846 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 OR2A12Q8NGT7 310 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 RAPGEF5Q92565 580 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 PRCCQ92733 491 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 TRIM11Q96F44 468 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 NSMCE3Q96MG7 304 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 GPR174Q9BXC1 333 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 ACE2Q9BYF1 805 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-201ENST00000311943 PCDH18Q9HCL0 1135 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 PCDHA13Q9Y5I0 950 aa12.32□□□□□ -0.44
SCFD1-201ENST00000311943 CHD5Q8TDI0 1954 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 CCDC163A0A0D9SF12 145 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 ILVBLA1L0T0 632 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 MAGEA1P43355 309 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 MARCKSL1P49006 195 aa12.31□□□□□ -0.44
SCFD1-201ENST00000311943 RPL6Q02878 288 aaKnown RBP12.31□□□□□ -0.44
SCFD1-201ENST00000311943 POLD3Q15054 466 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms