RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 RPL7AP62424 266 aaKnown RBP16.72■□□□□ 0.27
LSM1-201ENST00000311351 FANCCQ00597 558 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 GRIK2Q13002 908 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 NR1I3Q14994 352 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 DLG2Q15700 870 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 ZSCAN23Q3MJ62 389 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 ARL13BQ3SXY8 428 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 C6orf118Q5T5N4 469 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 ACBD5Q5T8D3 534 aaPredicted RBP16.72■□□□□ 0.27
LSM1-201ENST00000311351 FAM72AQ5TYM5 149 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 MANEALQ5VSG8 457 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 ACAD10Q6JQN1 1059 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 FAM72DQ6L9T8 149 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 LINGO4Q6UY18 593 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 SETD3Q86TU7 594 aaPredicted RBP16.72■□□□□ 0.27
LSM1-201ENST00000311351 FAM72BQ86X60 149 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 DRC7Q8IY82 874 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 DCAF4L2Q8NA75 395 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 PPP1R9BQ96SB3 815 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 C2orf49Q9BVC5 232 aaPredicted RBP16.72■□□□□ 0.27
LSM1-201ENST00000311351 ZYG11BQ9C0D3 744 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 PCED1AQ9H1Q7 454 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 NEUROG2Q9H2A3 272 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 SCML1Q9UN30 329 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 NCKAP1Q9Y2A7 1128 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 SIGLEC16A6NMB1 481 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 ADH1BP00325 375 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 ADRB1P08588 477 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 VASPP50552 380 aaPredicted RBP16.71■□□□□ 0.27
LSM1-201ENST00000311351 NOVA1P51513 510 aaKnown RBP16.71■□□□□ 0.27
LSM1-201ENST00000311351 OGDHQ02218 1023 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 POM121L1PQ3SYA9 428 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 PPP1R15BQ5SWA1 713 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 SFMBT2Q5VUG0 894 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 RWDD4Q6NW29 188 aaKnown RBP16.71■□□□□ 0.27
LSM1-201ENST00000311351 NCEH1Q6PIU2 408 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 LRSAM1Q6UWE0 723 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 LAYNQ6UX15 382 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 ZNF571Q7Z3V5 609 aaPredicted RBP16.71■□□□□ 0.27
LSM1-201ENST00000311351 HDDC3Q8N4P3 179 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 C1orf216Q8TAB5 229 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 OR8D1Q8WZ84 308 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 BIRC7Q96CA5 298 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 OMDQ99983 421 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 HAUS4Q9H6D7 363 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 NDFIP2Q9NV92 336 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 PPARGC1AQ9UBK2 798 aaKnown RBP16.71■□□□□ 0.27
LSM1-201ENST00000311351 OR12D3Q9UGF7 316 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 SARDHQ9UL12 918 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 HS3ST2Q9Y278 367 aa16.71■□□□□ 0.27
LSM1-201ENST00000311351 TPRP12270 2363 aaKnown RBP16.7■□□□□ 0.26
LSM1-201ENST00000311351 BCAT2O15382 392 aaPredicted RBP16.7■□□□□ 0.26
LSM1-201ENST00000311351 SMAD6O43541 496 aaKnown RBP16.7■□□□□ 0.26
LSM1-201ENST00000311351 IGHV4-34P06331 123 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 C5AR1P21730 350 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 DRD3P35462 400 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 ZNF143P52747 638 aaPredicted RBP16.7■□□□□ 0.26
LSM1-201ENST00000311351 GALCP54803 685 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 TPM4P67936 248 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 KRT83P78385 493 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 BNC1Q01954 994 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 NRG1Q02297 640 aaPredicted RBP16.7■□□□□ 0.26
LSM1-201ENST00000311351 N4BP2L1Q5TBK1 243 aaPredicted RBP16.7■□□□□ 0.26
LSM1-201ENST00000311351 KIAA0895LQ68EN5 471 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 PYROXD2Q8N2H3 581 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 ATP11CQ8NB49 1132 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 DEFB124Q8NES8 71 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 NTAN1Q96AB6 310 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 SPON2Q9BUD6 331 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 AIPL1Q9NZN9 384 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 FZD4Q9ULV1 537 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 CHD8Q9HCK8 2581 aa16.7■□□□□ 0.26
LSM1-201ENST00000311351 DOCK9Q9BZ29 2069 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 ILVBLA1L0T0 632 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 ANKRD62A6NC57 917 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 CBX4O00257 560 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 DDX3XO00571 662 aaKnown RBP eCLIP16.69■□□□□ 0.262e-7■■■■■ 39.2
LSM1-201ENST00000311351 LRIG2O94898 1065 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 SYPP08247 313 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 PLEKP08567 350 aaPredicted RBP16.69■□□□□ 0.26
LSM1-201ENST00000311351 SKILP12757 684 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 ACVRL1P37023 503 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 PBX1P40424 430 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 PRKCIP41743 596 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 ADPRHP54922 357 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 GNA12Q03113 381 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 KLHL30Q0D2K2 578 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 SCYL2Q6P3W7 929 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 C22orf39Q6P5X5 142 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 DCUN1D2Q6PH85 259 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 NLRP14Q86W24 1093 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 TBC1D31Q96DN5 1066 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 ORAI3Q9BRQ5 295 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 OSBPL2Q9H1P3 480 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 TNKS2Q9H2K2 1166 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 ATP13A1Q9HD20 1204 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 TM9SF3Q9HD45 589 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 ADAMTS1Q9UHI8 967 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 ACTL7AQ9Y615 435 aa16.69■□□□□ 0.26
LSM1-201ENST00000311351 A0A1B0GVT2 93 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms