RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 RAMP2O60895 175 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 LRP3O75074 770 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 RARAP10276 462 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 SLC1A1P43005 524 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 MAGEA1P43355 309 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 PXNP49023 591 aaPredicted RBP18.23■□□□□ 0.51
CCS-201ENST00000310190 GEMIN4P57678 1058 aaKnown RBP18.23■□□□□ 0.51
CCS-201ENST00000310190 GSDMDP57764 484 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 TPI1P60174 286 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 HADHQ16836 314 aaKnown RBP18.23■□□□□ 0.51
CCS-201ENST00000310190 HEATR6Q6AI08 1181 aaKnown RBP18.23■□□□□ 0.51
CCS-201ENST00000310190 RETSATQ6NUM9 610 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 RWDD4Q6NW29 188 aaKnown RBP18.23■□□□□ 0.51
CCS-201ENST00000310190 RFX8Q6ZV50 586 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 TMPRSS6Q8IU80 811 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 HMGB4Q8WW32 186 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 CASKIN2Q8WXE0 1202 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 DHX35Q9H5Z1 703 aaKnown RBP18.23■□□□□ 0.51
CCS-201ENST00000310190 LRRC19Q9H756 370 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 OSGEPQ9NPF4 335 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 CWC15Q9P013 229 aaKnown RBP18.23■□□□□ 0.51
CCS-201ENST00000310190 SMG5Q9UPR3 1016 aaKnown RBP18.23■□□□□ 0.51
CCS-201ENST00000310190 PCDHA13Q9Y5I0 950 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 RAD54BQ9Y620 910 aa18.23■□□□□ 0.51
CCS-201ENST00000310190 GON4LQ3T8J9 2241 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 C10orf142B7Z368 130 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 EEF2KO00418 725 aaKnown RBP18.22■□□□□ 0.51
CCS-201ENST00000310190 PJA2O43164 708 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 CD160O95971 181 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 KRT7P08729 469 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 SRCP12931 536 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 HLA-EP13747 358 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 TCF4P15884 667 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 OXTRP30559 389 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 HOXD11P31277 338 aaPredicted RBP18.22■□□□□ 0.51
CCS-201ENST00000310190 SIM2Q14190 667 aaPredicted RBP18.22■□□□□ 0.51
CCS-201ENST00000310190 ELAVL3Q14576 367 aaKnown RBP18.22■□□□□ 0.51
CCS-201ENST00000310190 POLD3Q15054 466 aaPredicted RBP18.22■□□□□ 0.51
CCS-201ENST00000310190 SPA17Q15506 151 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 PLK5Q496M5 336 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 SLC36A4Q6YBV0 504 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 USP30Q70CQ3 517 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 SIPA1Q96FS4 1042 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 BTBD6Q96KE9 485 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 SPACA7Q96KW9 195 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 RPL10LQ96L21 214 aaKnown RBP18.22■□□□□ 0.51
CCS-201ENST00000310190 FAM129BQ96TA1 746 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 BAG1Q99933 345 aaPredicted RBP18.22■□□□□ 0.51
CCS-201ENST00000310190 PCED1AQ9H1Q7 454 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 DUSP15Q9H1R2 295 aaPredicted RBP18.22■□□□□ 0.51
CCS-201ENST00000310190 ZWILCHQ9H900 591 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 PCDHGA5Q9Y5G8 931 aa18.22■□□□□ 0.51
CCS-201ENST00000310190 THADAQ6YHU6 1953 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 IGHV1OR15-9A0A0B4J2B8 117 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 TTC34A8MYJ7 566 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 MCF2LO15068 1137 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 KDELR3O43731 214 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 CREB3O43889 395 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 SIN3BO75182 1162 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 RETP07949 1114 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 IL4RP24394 825 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 STK19P49842 368 aaPredicted RBP18.21■□□□□ 0.51
CCS-201ENST00000310190 RPS14P62263 151 aaKnown RBP18.21■□□□□ 0.51
CCS-201ENST00000310190 ARF5P84085 180 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 SFSWAPQ12872 951 aaKnown RBP18.21■□□□□ 0.51
CCS-201ENST00000310190 SERINC3Q13530 473 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 PDK2Q15119 407 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 DLG2Q15700 870 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 INO80DQ53TQ3 878 aaPredicted RBP18.21■□□□□ 0.51
CCS-201ENST00000310190 PMS2CLQ68D20 193 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 ZNF776Q68DI1 518 aaPredicted RBP18.21■□□□□ 0.51
CCS-201ENST00000310190 ASCL5Q7RTU5 278 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 OR7D4Q8NG98 312 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 PRCCQ92733 491 aaPredicted RBP18.21■□□□□ 0.51
CCS-201ENST00000310190 FAF2Q96CS3 445 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 PCDH18Q9HCL0 1135 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 ATP13A1Q9HD20 1204 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 GPATCH2LQ9NWQ4 482 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 BCCIPQ9P287 314 aaKnown RBP eCLIP18.21■□□□□ 0.51
CCS-201ENST00000310190 CEP192Q8TEP8 1941 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 CACNA1EQ15878 2313 aa18.21■□□□□ 0.51
CCS-201ENST00000310190 TNRC6BQ9UPQ9 1833 aaKnown RBP18.21■□□□□ 0.51
CCS-201ENST00000310190 SOWAHDA6NJG2 315 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 GOLGA6L6A8MZA4 724 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 H3BRJ5 948 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 DCLK1O15075 740 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 SNAP91O60641 907 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 ZNF821O75541 412 aaPredicted RBP18.2■□□□□ 0.5
CCS-201ENST00000310190 RHOBTB1O94844 696 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 MT-CO1P00395 513 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 GOT1P17174 413 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 ERCC2P18074 760 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 ARL4AP40617 200 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 SERPINH1P50454 418 aaKnown RBP18.2■□□□□ 0.5
CCS-201ENST00000310190 TXNRD3NBQ6F5E7 133 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 RAD9BQ6WBX8 426 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 LRRC49Q8IUZ0 686 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 PCDH20Q8N6Y1 951 aaKnown RBP18.2■□□□□ 0.5
CCS-201ENST00000310190 CSPG4P5Q96PW8 444 aa18.2■□□□□ 0.5
CCS-201ENST00000310190 TPSD1Q9BZJ3 242 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms