RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CEP290O15078 2479 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 TRIP11Q15643 1979 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 MYBPHLA2RUH7 354 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 F8W810 466 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 SMAPO00193 183 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 TNPO2O14787 897 aaKnown RBP12.9□□□□□ -0.34
RETREG3-201ENST00000309428 BNIP3LO60238 219 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 SPAG6O75602 509 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 TNFAIP8O95379 198 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 COX4I1P13073 169 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 TAF6P49848 677 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 ZNF132P52740 706 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 MAPK11Q15759 364 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 NADK2Q4G0N4 442 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 AGKQ53H12 422 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 SLC27A1Q6PCB7 646 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 OR6P1Q8NGX9 317 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 NPLOC4Q8TAT6 608 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 LENG8Q96PV6 779 aaPredicted RBP12.9□□□□□ -0.34
RETREG3-201ENST00000309428 TINF2Q9BSI4 451 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 SYBUQ9NX95 663 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 POMPQ9Y244 141 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 A0A0G2JLL6 359 aaPredicted RBP12.9□□□□□ -0.35
RETREG3-201ENST00000309428 ABLIM1O14639 778 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 ADCY6O43306 1168 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 SERPINE1P05121 402 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 TFPTP0C1Z6 253 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 TGM2P21980 687 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 SERPINB9P50453 376 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 NAA20P61599 178 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 RALGDSQ12967 914 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 NOMO1Q15155 1222 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 ZNF484Q5JVG2 852 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 TMEM198Q66K66 360 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 C16orf89Q6UX73 402 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 PLPPR4Q7Z2D5 763 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 GPR141Q7Z602 305 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 PRRT2Q7Z6L0 340 aaPredicted RBP12.9□□□□□ -0.35
RETREG3-201ENST00000309428 SPATA22Q8NHS9 363 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 SHKBP1Q8TBC3 707 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 PDCD6IPQ8WUM4 868 aaKnown RBP12.9□□□□□ -0.35
RETREG3-201ENST00000309428 HTR3CQ8WXA8 447 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 CSPG4P5Q96PW8 444 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 NPAS2Q99743 824 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 MROH8Q9H579 483 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 SFMBT1Q9UHJ3 866 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 ADAMTS5Q9UNA0 930 aa12.9□□□□□ -0.35
RETREG3-201ENST00000309428 H3BSA7 217 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 STRNO43815 780 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 MT-ND1P03886 318 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 DLDP09622 509 aaKnown RBP12.89□□□□□ -0.35
RETREG3-201ENST00000309428 YBX3P16989 372 aaKnown RBP eCLIP12.89□□□□□ -0.353e-10■■□□□ 12.4
RETREG3-201ENST00000309428 FDFT1P37268 417 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 ZNF157P51786 506 aaPredicted RBP12.89□□□□□ -0.35
RETREG3-201ENST00000309428 MAXP61244 160 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 PQLC1Q8N2U9 271 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 PQLC3Q8N755 202 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 ENDOVQ8N8Q3 282 aaKnown RBP12.89□□□□□ -0.35
RETREG3-201ENST00000309428 GIPC3Q8TF64 312 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 PHF21BQ96EK2 531 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 CIB1Q99828 191 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 RRN3Q9NYV6 651 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 FAM72CH0Y354 149 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 MDM4O15151 490 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 PIGNO95427 931 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 THRAP10827 490 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 HSPA8P11142 646 aaKnown RBP12.89□□□□□ -0.35
RETREG3-201ENST00000309428 THPOP40225 353 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 NOMO2Q5JPE7 1267 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 LDLRAP1Q5SW96 308 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 FAM72AQ5TYM5 149 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 SEL1L3Q68CR1 1132 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 OR52E8Q6IFG1 317 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 FAM72DQ6L9T8 149 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 RPS27LQ71UM5 84 aaKnown RBP12.89□□□□□ -0.35
RETREG3-201ENST00000309428 LDB1Q86U70 411 aaPredicted RBP12.89□□□□□ -0.35
RETREG3-201ENST00000309428 FAM72BQ86X60 149 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 DENND1AQ8TEH3 1009 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 P2RY11Q96G91 374 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 PLEKHA5Q9HAU0 1116 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 CDYLQ9Y232 598 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 A0A096LPK6 155 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 YJEFN3A6XGL0 299 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 BPGMP07738 259 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 SERPINA6P08185 405 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 CARTPTQ16568 116 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 PPM1LQ5SGD2 360 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 OTOP3Q7RTS5 596 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 TSPAN14Q8NG11 270 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 RNF139Q8WU17 664 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 NACA2Q9H009 215 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 ASB7Q9H672 318 aa12.89□□□□□ -0.35
RETREG3-201ENST00000309428 SOAT2O75908 522 aa12.88□□□□□ -0.35
RETREG3-201ENST00000309428 POLBP06746 335 aa12.88□□□□□ -0.35
RETREG3-201ENST00000309428 PBX3P40426 434 aa12.88□□□□□ -0.35
RETREG3-201ENST00000309428 PCYT1AP49585 367 aa12.88□□□□□ -0.35
RETREG3-201ENST00000309428 C9orf57Q5W0N0 161 aa12.88□□□□□ -0.35
RETREG3-201ENST00000309428 FAM117BQ6P1L5 589 aa12.88□□□□□ -0.35
RETREG3-201ENST00000309428 DCAKDQ8WVC6 231 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms