RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 PLIN3O60664 434 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 FKTNO75072 461 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 ITGAXP20702 1163 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 SNRPFP62306 86 aaKnown RBP14.86□□□□□ -0.03
PTPN9-201ENST00000306726 CCNIQ14094 377 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 NEDD8Q15843 81 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 OTUD3Q5T2D3 398 aaPredicted RBP14.86□□□□□ -0.03
PTPN9-201ENST00000306726 LRRC38Q5VT99 294 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 TSHZ1Q6ZSZ6 1077 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 SPATA22Q8NHS9 363 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 TMIGD2Q96BF3 282 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 SERPINI1Q99574 410 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 SIX4Q9UIU6 781 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 KCNU1A8MYU2 1149 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 NDC80O14777 642 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 CASQ2O14958 399 aaPredicted RBP14.86□□□□□ -0.03
PTPN9-201ENST00000306726 TIPRLO75663 272 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 LYPLA2O95372 231 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 NCAM1P13591 858 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 GRIA4P48058 902 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 EFNA5P52803 228 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 MAP3K7CLP57077 242 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 PPIDQ08752 370 aaKnown RBP14.86□□□□□ -0.03
PTPN9-201ENST00000306726 TLR1Q15399 786 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 C15orf39Q6ZRI6 1047 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 CLVS1Q8IUQ0 354 aaPredicted RBP14.86□□□□□ -0.03
PTPN9-201ENST00000306726 KYQ8NBH2 561 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 OR9I1Q8NGQ6 314 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 OSMRQ99650 979 aa14.86□□□□□ -0.03
PTPN9-201ENST00000306726 ARHGEF37A1IGU5 675 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 SPATA31C2B4DYI2 1134 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 EEF2KO00418 725 aaKnown RBP14.85□□□□□ -0.03
PTPN9-201ENST00000306726 C2P06681 752 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 PSMC3P17980 439 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 YAP1P46937 504 aaKnown RBP14.85□□□□□ -0.03
PTPN9-201ENST00000306726 PPP1R8Q12972 351 aaKnown RBP14.85□□□□□ -0.03
PTPN9-201ENST00000306726 ZIK1Q3SY52 487 aaPredicted RBP14.85□□□□□ -0.03
PTPN9-201ENST00000306726 ARL13AQ5H913 290 aaPredicted RBP14.85□□□□□ -0.03
PTPN9-201ENST00000306726 SEL1L3Q68CR1 1132 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 SEPHS2Q99611 448 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 HAUS8Q9BT25 410 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 ST6GALNAC4Q9H4F1 302 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 NOL11Q9H8H0 719 aaKnown RBP14.85□□□□□ -0.03
PTPN9-201ENST00000306726 WDR41Q9HAD4 459 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 USP29Q9HBJ7 922 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 TUBGCP4Q9UGJ1 667 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 NUP205Q92621 2012 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 PDLIM1O00151 329 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 XPOTO43592 962 aaKnown RBP14.85□□□□□ -0.03
PTPN9-201ENST00000306726 MSCO60682 206 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 FKBP6O75344 327 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 PIRTP0C851 137 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 GRIA2P42262 883 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 GPD2P43304 727 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 MPP3Q13368 585 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 KCNJ11Q14654 390 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 TTLL4Q14679 1199 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 NOMO2Q5JPE7 1267 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 NAPRTQ6XQN6 538 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 TMC7Q7Z402 723 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 DENND6AQ8IWF6 608 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 GATA5Q9BWX5 397 aaPredicted RBP14.85□□□□□ -0.03
PTPN9-201ENST00000306726 ABHD16BQ9H3Z7 469 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 DHX33Q9H6R0 707 aaKnown RBP14.85□□□□□ -0.03
PTPN9-201ENST00000306726 WARS2Q9UGM6 360 aaKnown RBP14.85□□□□□ -0.03
PTPN9-201ENST00000306726 CROCCQ5TZA2 2017 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 JUNP05412 331 aaKnown RBP14.85□□□□□ -0.03
PTPN9-201ENST00000306726 IQCF3P0C7M6 154 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 PIK3R1P27986 724 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 NSUN2Q08J23 767 aaKnown RBP eCLIP14.85□□□□□ -0.03
PTPN9-201ENST00000306726 SOWAHAQ2M3V2 549 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 MFSD14CQ5VZR4 134 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 FBXL19Q6PCT2 694 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 OTOP3Q7RTS5 596 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 OFCC1Q8IZS5 231 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 DSELQ8IZU8 1212 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 GATA6Q92908 595 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 CCDC90BQ9GZT6 254 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 NMRAL1Q9HBL8 299 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 DDIT4Q9NX09 232 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 COPG2Q9UBF2 871 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 MICAL3Q7RTP6 2002 aa14.85□□□□□ -0.03
PTPN9-201ENST00000306726 FDFT1P37268 417 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 LRRC8BQ6P9F7 803 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 FAM81AQ8TBF8 368 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 HBEGFQ99075 208 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 SARS2Q9NP81 518 aaKnown RBP14.84□□□□□ -0.03
PTPN9-201ENST00000306726 EPS15L1Q9UBC2 864 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 C3orf70A6NLC5 250 aaPredicted RBP14.84□□□□□ -0.03
PTPN9-201ENST00000306726 LIN7AO14910 233 aaPredicted RBP14.84□□□□□ -0.03
PTPN9-201ENST00000306726 CHADO15335 359 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 SUPT7LO94864 414 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 TPI1P60174 286 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 PQLC1Q8N2U9 271 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 CXorf38Q8TB03 319 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 LRTOMTQ8WZ04 291 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 MAML3Q96JK9 1138 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 DTLQ9NZJ0 730 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 VANGL2Q9ULK5 521 aa14.84□□□□□ -0.03
PTPN9-201ENST00000306726 RBM47A0AV96 593 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms