RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 GBA3Q9H227 469 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 EPB41L4BQ9H329 900 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 SFXN1Q9H9B4 322 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 NYNRINQ9P2P1 1898 aaKnown RBP17.9■□□□□ 0.46
KRT28-201ENST00000306658 E2F8A0AVK6 867 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 ILVBLA1L0T0 632 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 GOLGA6CA6NDK9 693 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 E7ESA3 106 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 GOLGA6DP0CG33 693 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 NTHL1P78549 312 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 GNA12Q03113 381 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 IL10RBQ08334 325 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 CBLBQ13191 982 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 PRPSAP1Q14558 356 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 FNBP1LQ5T0N5 605 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 CPXM2Q8N436 756 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 SH3RF2Q8TEC5 729 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 MAML1Q92585 1016 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 ARHGEF2Q92974 986 aaKnown RBP17.9■□□□□ 0.46
KRT28-201ENST00000306658 SERPINB12Q96P63 405 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 PPP1R2P1Q96PQ5 205 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 XAB2Q9HCS7 855 aaKnown RBP17.9■□□□□ 0.46
KRT28-201ENST00000306658 TDP1Q9NUW8 608 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 DZANK1Q9NVP4 752 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 GOLGA6AQ9NYA3 693 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 NINJ2Q9NZG7 142 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 TBC1D30Q9Y2I9 924 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 MRPS23Q9Y3D9 190 aaKnown RBP17.9■□□□□ 0.46
KRT28-201ENST00000306658 TRANK1O15050 2925 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 NOTCH4Q99466 2003 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 ERI2A8K979 691 aaKnown RBP17.9■□□□□ 0.46
KRT28-201ENST00000306658 TBL1XO60907 577 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 PAPLNO95428 1278 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 ACSL3O95573 720 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 RHOCP08134 193 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 CD68P34810 354 aaPredicted RBP17.9■□□□□ 0.46
KRT28-201ENST00000306658 ETFBP38117 255 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 SGSHP51688 502 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 KCNC3Q14003 757 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 BBS9Q3SYG4 887 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 KRT222Q8N1A0 295 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 CNTD1Q8N815 330 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 PDCD7Q8N8D1 485 aaKnown RBP17.9■□□□□ 0.46
KRT28-201ENST00000306658 USP33Q8TEY7 942 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 PYROXD1Q8WU10 500 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 C9orf72Q96LT7 481 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 RBM22Q9NW64 420 aaKnown RBP eCLIP17.9■□□□□ 0.46
KRT28-201ENST00000306658 NFS1Q9Y697 457 aa17.9■□□□□ 0.46
KRT28-201ENST00000306658 GOLGA6L10A6NI86 522 aa17.89■□□□□ 0.45
KRT28-201ENST00000306658 F5H423 210 aaPredicted RBP17.89■□□□□ 0.45
KRT28-201ENST00000306658 H0Y626 953 aa17.89■□□□□ 0.45
KRT28-201ENST00000306658 J3KR12 359 aa17.89■□□□□ 0.45
KRT28-201ENST00000306658 GFRA2O00451 464 aa17.89■□□□□ 0.45
KRT28-201ENST00000306658 SCAMP3O14828 347 aaKnown RBP17.89■□□□□ 0.45
KRT28-201ENST00000306658 PSMD3O43242 534 aa17.89■□□□□ 0.45
KRT28-201ENST00000306658 NFKB1P19838 968 aa17.89■□□□□ 0.45
KRT28-201ENST00000306658 MPPE1Q53F39 396 aa17.89■□□□□ 0.45
KRT28-201ENST00000306658 DNAJC21Q5F1R6 531 aaKnown RBP17.89■□□□□ 0.45
KRT28-201ENST00000306658 MARC1Q5VT66 337 aa17.89■□□□□ 0.45
KRT28-201ENST00000306658 TMC5Q6UXY8 1006 aa17.89■□□□□ 0.45
KRT28-201ENST00000306658 ZNF783Q6ZMS7 281 aa17.89■□□□□ 0.45
KRT28-201ENST00000306658 BBS7Q8IWZ6 715 aa17.89■□□□□ 0.45
KRT28-201ENST00000306658 TDRD5Q8NAT2 981 aaKnown RBP17.89■□□□□ 0.45
KRT28-201ENST00000306658 PABPC5Q96DU9 382 aaKnown RBP17.89■□□□□ 0.45
KRT28-201ENST00000306658 SMG9Q9H0W8 520 aaKnown RBP17.89■□□□□ 0.45
KRT28-201ENST00000306658 AAR2Q9Y312 384 aaKnown RBP17.89■□□□□ 0.45
KRT28-201ENST00000306658 ATG2AQ2TAZ0 1938 aa17.89■□□□□ 0.45
KRT28-201ENST00000306658 RFXAPO00287 272 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 PRAMEF11O60813 436 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 MLNP12872 115 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 ACVRL1P37023 503 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 MSS51Q4VC12 460 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 CEP85LQ5SZL2 805 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 MPP7Q5T2T1 576 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 IL31Q6EBC2 164 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 CROCCP2Q86T23 111 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 CAND1Q86VP6 1230 aaKnown RBP17.88■□□□□ 0.45
KRT28-201ENST00000306658 C12orf76Q8N812 135 aaPredicted RBP17.88■□□□□ 0.45
KRT28-201ENST00000306658 OR2W6PQ8NHA6 318 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 DDI1Q8WTU0 396 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 USP13Q92995 863 aaPredicted RBP17.88■□□□□ 0.45
KRT28-201ENST00000306658 ZBTB9Q96C00 473 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 LRRC39Q96DD0 335 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 ZNF599Q96NL3 588 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 SH3GL2Q99962 352 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 IGFLR1Q9H665 355 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 GLOD4Q9HC38 313 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 CCL26Q9Y258 94 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 HELZP42694 1942 aaKnown RBP17.88■□□□□ 0.45
KRT28-201ENST00000306658 CHD5Q8TDI0 1954 aa17.88■□□□□ 0.45
KRT28-201ENST00000306658 A0A0D9SEW6 157 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 CACNG3O60359 315 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 ANXA9O76027 345 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 AP2A1O95782 977 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 SYF2O95926 243 aaKnown RBP17.87■□□□□ 0.45
KRT28-201ENST00000306658 PEX11BO96011 259 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 ABHD2P08910 425 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 IFNAR2P48551 515 aa17.87■□□□□ 0.45
KRT28-201ENST00000306658 FASTKD3Q14CZ7 662 aaKnown RBP17.87■□□□□ 0.45
KRT28-201ENST00000306658 CCDC38Q502W7 563 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms