RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CHORDC1Q9UHD1 332 aaPredicted RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 ADAM28Q9UKQ2 775 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 PCDHGC5Q9Y5F6 944 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 RGS5O15539 181 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 RBP1P09455 135 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 TKTP29401 623 aaKnown RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 PRKCZQ05513 592 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 RINLQ6ZS11 566 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 COLGALT2Q8IYK4 626 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 RTL3Q8N8U3 475 aaKnown RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 POP5Q969H6 163 aaKnown RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 RBM15Q96T37 977 aaKnown RBP eCLIP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 ZYG11BQ9C0D3 744 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 RAD21L1Q9H4I0 556 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 AGPAT5Q9NUQ2 364 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 ZNF214Q9UL59 606 aaPredicted RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 VPS4BO75351 444 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 FGFR1P11362 822 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 CYLC2Q14093 348 aaPredicted RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 AMHR2Q16671 573 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SLC44A4Q53GD3 710 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 ARMC12Q5T9G4 340 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 RTL10Q7L3V2 364 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 SAPCD2Q86UD0 394 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 CEP295NLQ96MC4 621 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 ZCWPW1Q9H0M4 648 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 BRD9Q9H8M2 597 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 PCMTD2Q9NV79 361 aa8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 MTO1Q9Y2Z2 717 aaKnown RBP8.47□□□□□ -1.05
PCDHB1-201ENST00000306549 MICAL2O94851 1124 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 KRT75O95678 551 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 ITGB5P18084 799 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 COMTP21964 271 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 PAICSP22234 425 aaKnown RBP8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 TEAD4Q15561 434 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 C9orf57Q5W0N0 161 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 TRPM8Q7Z2W7 1104 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 AHI1Q8N157 1196 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 SLC2A14Q8TDB8 520 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 RXFP2Q8WXD0 754 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 CASKIN2Q8WXE0 1202 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 ACBD6Q9BR61 282 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 SPRTNQ9H040 489 aaPredicted RBP8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 LHX5Q9H2C1 402 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 ELOVL6Q9H5J4 265 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 GTF2IRD1Q9UHL9 959 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 HBS1LQ9Y450 684 aaKnown RBP8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 RGPD4Q7Z3J3 1758 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 PAPPA2Q9BXP8 1791 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 CHURC1-FNTBB4DL54 471 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 ATG13O75143 517 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 CNOT3O75175 753 aaKnown RBP8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 GRAP2O75791 330 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 OR56A5P0C7T3 313 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 ARF4P18085 180 aaPredicted RBP8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 COPZ1P61923 177 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 CHRNB3Q05901 458 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 MAD2L1Q13257 205 aaPredicted RBP8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 SCARA3Q6AZY7 606 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 CDC73Q6P1J9 531 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 RBM43Q6ZSC3 357 aaKnown RBP8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 CYP2W1Q8TAV3 490 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 OR8D1Q8WZ84 308 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 KIAA1522Q9P206 1035 aaPredicted RBP8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 ZMYND8Q9ULU4 1186 aaPredicted RBP8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 PADI3Q9ULW8 664 aa8.46□□□□□ -1.05
PCDHB1-201ENST00000306549 PMPCBO75439 489 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 SEC31AO94979 1220 aaKnown RBP8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 MAPKAPK2P49137 400 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 CCNG1P51959 295 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 RAD23BP54727 409 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 PLOD1Q02809 727 aaPredicted RBP8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 CDH17Q12864 832 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNHIT3Q15649 155 aaPredicted RBP8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 PMF1Q6P1K2 205 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 CEP68Q76N32 757 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 NT5DC3Q86UY8 548 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 C19orf18Q8NEA5 215 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 TIFAQ96CG3 184 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 SH3GL3Q99963 347 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 NTPCRQ9BSD7 190 aaKnown RBP8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 DUSP16Q9BY84 665 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 CLEC4MQ9H2X3 399 aaPredicted RBP8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 PAPPAQ13219 1627 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 SLCO1B7G3V0H7 640 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 XPO1O14980 1071 aaKnown RBP8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 TIPRLO75663 272 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 GLP2RO95838 553 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 GLI3P10071 1580 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 PSMC6P62333 389 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 KIAA0319LQ8IZA0 1049 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 TERB1Q8NA31 727 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 ATL1Q8WXF7 558 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 MFSD14AQ96MC6 490 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNF711Q9Y462 761 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 MGRN1O60291 552 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 AGTP01019 485 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 ELNP15502 786 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 CXCR2P25025 360 aa8.46□□□□□ -1.06
PCDHB1-201ENST00000306549 PDX1P52945 283 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms