RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ZNF335Q9H4Z2 1342 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 BHMG1C9JSJ3 638 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 MRASO14807 208 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 PSME3P61289 254 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 RHOAP61586 193 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 ADAM17P78536 824 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 SPIBQ01892 262 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 THAP1Q9NVV9 213 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 ITGB3P05106 788 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 ADSSP30520 456 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 PDX1P52945 283 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 ZC2HC1CQ53FD0 456 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 IQSEC1Q6DN90 963 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 OAFQ86UD1 273 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 SNX32Q86XE0 403 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 SYT12Q8IV01 421 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 SPERTQ8NA61 448 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 TSEN15Q8WW01 171 aaKnown RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 DGCR14Q96DF8 476 aaKnown RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 METTL8Q9H825 291 aaKnown RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 KLK14Q9P0G3 267 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 USP18Q9UMW8 372 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 TAF6LQ9Y6J9 622 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 OAS3Q9Y6K5 1087 aaKnown RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 VPS72Q15906 364 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 FAM196AQ6ZSG2 479 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 TFR2Q9UP52 801 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 TKTP29401 623 aaKnown RBP13.58□□□□□ -0.23
TRIM56-201ENST00000306085 GRIA3P42263 894 aa13.58□□□□□ -0.23
TRIM56-201ENST00000306085 TOB2Q14106 344 aaPredicted RBP13.58□□□□□ -0.23
TRIM56-201ENST00000306085 DEF8Q6ZN54 512 aa13.58□□□□□ -0.23
TRIM56-201ENST00000306085 TMPRSS6Q8IU80 811 aa13.58□□□□□ -0.23
TRIM56-201ENST00000306085 SP140LQ9H930 580 aa13.58□□□□□ -0.23
TRIM56-201ENST00000306085 TBC1D30Q9Y2I9 924 aa13.58□□□□□ -0.23
TRIM56-201ENST00000306085 TIPINQ9BVW5 301 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 TRPV5Q9NQA5 729 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 ZSCAN5CA6NGD5 496 aaPredicted RBP13.58□□□□□ -0.24
TRIM56-201ENST00000306085 APOBEC3FQ8IUX4 373 aaKnown RBP13.58□□□□□ -0.24
TRIM56-201ENST00000306085 ZZZ3Q8IYH5 903 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 TTLL6Q8N841 843 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 SLC4A11Q8NBS3 891 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 TSPAN18Q96SJ8 248 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 ZSCAN5AQ9BUG6 496 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 A0A1B0GTH6 734 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 FCHO1O14526 889 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 CCNKO75909 580 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 DHFRP00374 187 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 SRGNP10124 158 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 GLRA4Q5JXX5 417 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 AFTPHQ6ULP2 937 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 RAD51AP1Q96B01 352 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 FCRL4Q96PJ5 515 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 TDRD3Q9H7E2 651 aaKnown RBP13.58□□□□□ -0.24
TRIM56-201ENST00000306085 CASKO14936 926 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 KCNA6P17658 529 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 CLK3P49761 638 aaKnown RBP13.58□□□□□ -0.24
TRIM56-201ENST00000306085 STOX1Q6ZVD7 989 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 ZNF433Q8N7K0 673 aaPredicted RBP13.58□□□□□ -0.24
TRIM56-201ENST00000306085 NIF3L1Q9GZT8 377 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 COA1Q9GZY4 146 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 DCLK1O15075 740 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 GCNT7Q6ZNI0 430 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 MILR1Q7Z6M3 343 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 ADGRG2Q8IZP9 1017 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 SPAG16Q8N0X2 631 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 OR56A4Q8NGH8 313 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 DNAJA4Q8WW22 397 aaPredicted RBP13.58□□□□□ -0.24
TRIM56-201ENST00000306085 ANKRD7Q92527 254 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 RIOK2Q9BVS4 552 aaKnown RBP13.58□□□□□ -0.24
TRIM56-201ENST00000306085 DPP3Q9NY33 737 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 TTC7BQ86TV6 843 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 ADSSL1Q8N142 457 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 RP9Q8TA86 221 aaKnown RBP13.58□□□□□ -0.24
TRIM56-201ENST00000306085 SOHLH2Q9NX45 425 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 CLIC5Q9NZA1 410 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 SGTAO43765 313 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 GMFGO60234 142 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 FAM187BQ17R55 369 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 AADACL4Q5VUY2 407 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 ZNF180Q9UJW8 692 aa13.58□□□□□ -0.24
TRIM56-201ENST00000306085 DGAT1O75907 488 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 GIMD1P0DJR0 217 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 TAS2R41P59536 307 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 ZNF248Q8NDW4 579 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 STARD8Q92502 1023 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 KCNF1Q9H3M0 494 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 ABCB9Q9NP78 766 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 INTS7Q9NVH2 962 aaKnown RBP13.57□□□□□ -0.24
TRIM56-201ENST00000306085 C21orf2O43822 256 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 RECQL5O94762 991 aaPredicted RBP13.57□□□□□ -0.24
TRIM56-201ENST00000306085 ZBTB11O95625 1053 aaPredicted RBP13.57□□□□□ -0.24
TRIM56-201ENST00000306085 AP2S1P53680 142 aaPredicted RBP13.57□□□□□ -0.24
TRIM56-201ENST00000306085 RBM44Q6ZP01 1051 aaKnown RBP13.57□□□□□ -0.24
TRIM56-201ENST00000306085 HERC6Q8IVU3 1022 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 C12orf56Q8IXR9 622 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 GPR108Q9NPR9 543 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 CACNA1CQ13936 2221 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 ASXL3Q9C0F0 2248 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 PROCP04070 461 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms