RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PDZD8Q8NEN9 1154 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 FBXO22Q8NEZ5 403 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 BCL7CQ8WUZ0 217 aaPredicted RBP19.81■□□□□ 0.76
HOXC4-201ENST00000303406 PTCD2Q8WV60 388 aaKnown RBP19.81■□□□□ 0.76
HOXC4-201ENST00000303406 ISL2Q96A47 359 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 FAM111AQ96PZ2 611 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 KIFC1Q9BW19 673 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 RNF208Q9H0X6 261 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 RXFP1Q9HBX9 757 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 MRM3Q9HC36 420 aaKnown RBP19.81■□□□□ 0.76
HOXC4-201ENST00000303406 NSMCE4AQ9NXX6 385 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 ZFATQ9P243 1243 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 HCSTQ9UBK5 93 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 SLC12A4Q9UP95 1085 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 SLC27A5Q9Y2P5 690 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 USH1CQ9Y6N9 552 aa19.81■□□□□ 0.76
HOXC4-201ENST00000303406 NUP205Q92621 2012 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.8■□□□□ 0.76
HOXC4-201ENST00000303406 CARNS1A5YM72 827 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 DNAJC8O75937 253 aaPredicted RBP19.8■□□□□ 0.76
HOXC4-201ENST00000303406 TGDSO95455 350 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 SCTRP47872 440 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 PAPOLAP51003 745 aaKnown RBP19.8■□□□□ 0.76
HOXC4-201ENST00000303406 BMPR2Q13873 1038 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 HNRNPDQ14103 355 aaKnown RBP19.8■□□□□ 0.76
HOXC4-201ENST00000303406 GALNTL6Q49A17 601 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 FYB2Q5VWT5 728 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 KYAT3Q6YP21 454 aaKnown RBP19.8■□□□□ 0.76
HOXC4-201ENST00000303406 TMEM173Q86WV6 379 aaPredicted RBP19.8■□□□□ 0.76
HOXC4-201ENST00000303406 STKLD1Q8NE28 680 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 SPOCK2Q92563 424 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 ZNF669Q96BR6 464 aaPredicted RBP19.8■□□□□ 0.76
HOXC4-201ENST00000303406 FCRL3Q96P31 734 aaPredicted RBP19.8■□□□□ 0.76
HOXC4-201ENST00000303406 TBL1YQ9BQ87 522 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 CRISPLD2Q9H0B8 497 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 NOL6Q9H6R4 1146 aaKnown RBP19.8■□□□□ 0.76
HOXC4-201ENST00000303406 CWH43Q9H720 699 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 ENTPD7Q9NQZ7 604 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 NDFIP2Q9NV92 336 aa19.8■□□□□ 0.76
HOXC4-201ENST00000303406 IPO11Q9UI26 975 aaKnown RBP19.8■□□□□ 0.76
HOXC4-201ENST00000303406 NYNRINQ9P2P1 1898 aaKnown RBP19.8■□□□□ 0.76
HOXC4-201ENST00000303406 DOCK4Q8N1I0 1966 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 NT5C1B-RDH14C9J2C7 533 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 BIRC5O15392 142 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 ALDH7A1P49419 539 aaKnown RBP19.79■□□□□ 0.76
HOXC4-201ENST00000303406 CSE1LP55060 971 aaKnown RBP19.79■□□□□ 0.76
HOXC4-201ENST00000303406 CCL23P55773 120 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 DUSP4Q13115 394 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 IKBKEQ14164 716 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 INSCQ1MX18 579 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 C5orf22Q49AR2 442 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 C10orf120Q5SQS8 335 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 MROH9Q5TGP6 573 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 CDHR3Q6ZTQ4 885 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 OTOP3Q7RTS5 596 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 OTOAQ7RTW8 1153 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 TAS1R1Q7RTX1 841 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 UNC5BQ8IZJ1 945 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 CCDC63Q8NA47 563 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 SLCO1B3Q9NPD5 702 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 PIH1D1Q9NWS0 290 aaKnown RBP19.79■□□□□ 0.76
HOXC4-201ENST00000303406 MPP6Q9NZW5 540 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 TXNDC16Q9P2K2 825 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 CDY1Q9Y6F8 540 aa19.79■□□□□ 0.76
HOXC4-201ENST00000303406 SLC12A8A0AV02 714 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 GLRA3O75311 464 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 USP12O75317 370 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 ITGA2BP08514 1039 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 TROVE2P10155 538 aaKnown RBP eCLIP19.78■□□□□ 0.76
HOXC4-201ENST00000303406 SPRP35270 261 aaPredicted RBP19.78■□□□□ 0.76
HOXC4-201ENST00000303406 ADRA1AP35348 466 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 MAGEA12P43365 314 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 MAPKAPK2P49137 400 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 MNX1P50219 401 aaPredicted RBP19.78■□□□□ 0.76
HOXC4-201ENST00000303406 RENBPP51606 427 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 MPP3Q13368 585 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 PSMD5Q16401 504 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 PCID2Q5JVF3 399 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 SPDYAQ5MJ70 313 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 KLHDC10Q6PID8 442 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 POTEHQ6S545 545 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 NDUFAF2Q8N183 169 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 MICALL1Q8N3F8 863 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 USP33Q8TEY7 942 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 IGSF21Q96ID5 467 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 RBBP8Q99708 897 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 SLC25A51Q9H1U9 297 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 ABCF3Q9NUQ8 709 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 RBM22Q9NW64 420 aaKnown RBP eCLIP19.78■□□□□ 0.76
HOXC4-201ENST00000303406 ZNF212Q9UDV6 495 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 AFF4Q9UHB7 1163 aaKnown RBP19.78■□□□□ 0.76
HOXC4-201ENST00000303406 TBX21Q9UL17 535 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 CAPN7Q9Y6W3 813 aa19.78■□□□□ 0.76
HOXC4-201ENST00000303406 COL4A6Q14031 1691 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 SOAT2O75908 522 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 PEX11BO96011 259 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 HLA-DQB2P05538 268 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 ATF6P18850 670 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 ALDH3A1P30838 453 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 YBEYP58557 167 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms