RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PAGE1O75459 146 aa22.38■■□□□ 1.17
TPM4-201ENST00000300933 HAUS5O94927 633 aa22.38■■□□□ 1.17
TPM4-201ENST00000300933 TROVE2P10155 538 aaKnown RBP eCLIP22.38■■□□□ 1.17
TPM4-201ENST00000300933 STMN2Q93045 179 aa22.38■■□□□ 1.17
TPM4-201ENST00000300933 ZBTB16Q05516 673 aa22.38■■□□□ 1.17
TPM4-201ENST00000300933 SLC34A1Q06495 639 aa22.38■■□□□ 1.17
TPM4-201ENST00000300933 RINLQ6ZS11 566 aa22.38■■□□□ 1.17
TPM4-201ENST00000300933 ATAD1Q8NBU5 361 aa22.38■■□□□ 1.17
TPM4-201ENST00000300933 SH3TC2Q8TF17 1288 aa22.38■■□□□ 1.17
TPM4-201ENST00000300933 ZNF669Q96BR6 464 aaPredicted RBP22.38■■□□□ 1.17
TPM4-201ENST00000300933 ZNF778Q96MU6 729 aa22.38■■□□□ 1.17
TPM4-201ENST00000300933 SAR1AQ9NR31 198 aa22.38■■□□□ 1.17
TPM4-201ENST00000300933 CHRAC1Q9NRG0 131 aa22.38■■□□□ 1.17
TPM4-201ENST00000300933 WASF2Q9Y6W5 498 aa22.38■■□□□ 1.17
TPM4-201ENST00000300933 PSMG1O95456 288 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 TBX18O95935 607 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 MT-CYBP00156 380 aaPredicted RBP22.37■■□□□ 1.17
TPM4-201ENST00000300933 ALDOAP04075 364 aaKnown RBP22.37■■□□□ 1.17
TPM4-201ENST00000300933 SERPINB3P29508 390 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 ARMC3Q5W041 872 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 PDZD4Q76G19 769 aaPredicted RBP22.37■■□□□ 1.17
TPM4-201ENST00000300933 CNTD1Q8N815 330 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 TBC1D13Q9NVG8 400 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 IGSF9Q9P2J2 1179 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 ARHGAP42A6NI28 874 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 NT5C1B-RDH14C9J2C7 533 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 TPP1O14773 563 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 ZCCHC18P0CG32 403 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 USP46P62068 366 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 NKX3-2P78367 333 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 LAMB3Q13751 1172 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 TRAF7Q6Q0C0 670 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 PACS1Q6VY07 963 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 C14orf80Q86SX3 495 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 RASSF3Q86WH2 238 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 RAET1EQ8TD07 263 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 IFT43Q96FT9 208 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 FCRL2Q96LA5 508 aaPredicted RBP22.37■■□□□ 1.17
TPM4-201ENST00000300933 C20orf27Q9GZN8 174 aa22.37■■□□□ 1.17
TPM4-201ENST00000300933 FAM237BA0A1B0GVD1 139 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 TNFRSF10BO14763 440 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 PGAM1P18669 254 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 CPA2P48052 419 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 CDK16Q00536 496 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 CHI3L2Q15782 390 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 TEX44Q53QW1 395 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 SLC24A5Q71RS6 500 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 RGS18Q9NS28 235 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 ZNF358Q9NW07 568 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 DSEQ9UL01 958 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 VANGL2Q9ULK5 521 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 SLC27A5Q9Y2P5 690 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 MLNP12872 115 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 GALNT2Q10471 571 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 THOC5Q13769 683 aaKnown RBP22.36■■□□□ 1.17
TPM4-201ENST00000300933 NOMO2Q5JPE7 1267 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 CMC1Q7Z7K0 106 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 APLFQ8IW19 511 aaPredicted RBP22.36■■□□□ 1.17
TPM4-201ENST00000300933 KBTBD2Q8IY47 623 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 PPFIBP2Q8ND30 876 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 SRRDQ9UH36 339 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 TET1Q8NFU7 2136 aa22.36■■□□□ 1.17
TPM4-201ENST00000300933 SF3B1O75533 1304 aaKnown RBP eCLIP22.35■■□□□ 1.176e-7■■■■■ 83
TPM4-201ENST00000300933 IRAK2O43187 625 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 CST5P28325 142 aaPredicted RBP22.35■■□□□ 1.17
TPM4-201ENST00000300933 TMPRSS15P98073 1019 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 PDE1BQ01064 536 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 NIPAL4Q0D2K0 466 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 STEAP4Q687X5 459 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 ATXN3LQ9H3M9 355 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 IRAK4Q9NWZ3 460 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 AP2A1O95782 977 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 AIF1P55008 147 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 OCRLQ01968 901 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 BST1Q10588 318 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 CBLBQ13191 982 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 HSP90AA5PQ58FG0 334 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 TTC7BQ86TV6 843 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 ZFAND2BQ8WV99 257 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 PTCD3Q96EY7 689 aaKnown RBP22.35■■□□□ 1.17
TPM4-201ENST00000300933 NSL1Q96IY1 281 aa22.35■■□□□ 1.17
TPM4-201ENST00000300933 RPL26L1Q9UNX3 145 aaKnown RBP22.35■■□□□ 1.17
TPM4-201ENST00000300933 TADA2AO75478 443 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 ALDH1A2O94788 518 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 POLBP06746 335 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 HCAR3P49019 387 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 NUDCD3Q8IVD9 361 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 SPNS2Q8IVW8 549 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 IRGQQ8WZA9 623 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 HDAC11Q96DB2 347 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 KCNK13Q9HB14 408 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 EIF2B3Q9NR50 452 aaKnown RBP22.34■■□□□ 1.17
TPM4-201ENST00000300933 ARMCX1Q9P291 453 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 NEU3Q9UQ49 428 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 MAP3K7O43318 606 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 PDE1CQ14123 709 aaPredicted RBP22.34■■□□□ 1.17
TPM4-201ENST00000300933 TFAP2DQ7Z6R9 452 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 COLGALT2Q8IYK4 626 aa22.34■■□□□ 1.17
TPM4-201ENST00000300933 ZSCAN18Q8TBC5 510 aaPredicted RBP22.34■■□□□ 1.17
TPM4-201ENST00000300933 ATP2A3Q93084 1043 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms