RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 LZTS1Q9Y250 596 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 SH3GLB1Q9Y371 365 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 A0A1B0GTW7 788 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 CCDC166P0CW27 439 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 SRGAP2BP0DMP2 458 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 MX2P20592 715 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 TAF6P49848 677 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 POU5F1BQ06416 359 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 TRMT5Q32P41 509 aaKnown RBP13.72□□□□□ -0.21
CTDP1-202ENST00000299543 SLC25A52Q3SY17 297 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 MMEL1Q495T6 779 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 KLHL35Q6PF15 583 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 UNC93AQ86WB7 457 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 SPATA6LQ8N4H0 392 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 B3GALNT2Q8NCR0 500 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 IARS2Q9NSE4 1012 aaKnown RBP13.72□□□□□ -0.21
CTDP1-202ENST00000299543 PIGVQ9NUD9 493 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 COPG2Q9UBF2 871 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 MORF4L1Q9UBU8 362 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 ZNF212Q9UDV6 495 aa13.72□□□□□ -0.21
CTDP1-202ENST00000299543 A0A096LPK6 155 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 MAGEC1O60732 1142 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 ARRB2P32121 409 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 GP5P40197 560 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 CCR10P46092 362 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 IDH3AP50213 366 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 TPI1P60174 286 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 DGKDQ16760 1214 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 IYDQ6PHW0 289 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 ARCQ7LC44 396 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 HPS6Q86YV9 775 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 SPNS2Q8IVW8 549 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 METTL25Q8N6Q8 603 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 RNF148Q8N7C7 305 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 OLFM3Q96PB7 478 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 KCNK16Q96T55 309 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 KLHL4Q9C0H6 718 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 CHRAC1Q9NRG0 131 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 DDIT4Q9NX09 232 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 VANGL2Q9ULK5 521 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 MAGEA6P43360 314 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 ACADSBP45954 432 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 ABCE1P61221 599 aaKnown RBP13.71□□□□□ -0.21
CTDP1-202ENST00000299543 CCNA1P78396 465 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 CCDC92Q53HC0 331 aaPredicted RBP13.71□□□□□ -0.21
CTDP1-202ENST00000299543 RWDD4Q6NW29 188 aaKnown RBP13.71□□□□□ -0.21
CTDP1-202ENST00000299543 FBXL19Q6PCT2 694 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 KLHDC10Q6PID8 442 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 RNF111Q6ZNA4 994 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 NET1Q7Z628 596 aaPredicted RBP13.71□□□□□ -0.21
CTDP1-202ENST00000299543 OSTM1Q86WC4 334 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 NT5DC4Q86YG4 428 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 ZNF781Q8N8C0 355 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 RNF169Q8NCN4 708 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 TNIP3Q96KP6 325 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 NR1H4Q96RI1 486 aaPredicted RBP13.71□□□□□ -0.21
CTDP1-202ENST00000299543 ULBP1Q9BZM6 244 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 WDR55Q9H6Y2 383 aaPredicted RBP13.71□□□□□ -0.21
CTDP1-202ENST00000299543 STAP1Q9ULZ2 295 aa13.71□□□□□ -0.21
CTDP1-202ENST00000299543 NRP1O14786 923 aa13.71□□□□□ -0.22
CTDP1-202ENST00000299543 ZBTB24O43167 697 aaPredicted RBP13.71□□□□□ -0.22
CTDP1-202ENST00000299543 PHGDHO43175 533 aaKnown RBP13.71□□□□□ -0.22
CTDP1-202ENST00000299543 GSRP00390 522 aa13.71□□□□□ -0.22
CTDP1-202ENST00000299543 JCHAINP01591 159 aa13.71□□□□□ -0.22
CTDP1-202ENST00000299543 USP17L7P0C7H9 530 aa13.71□□□□□ -0.22
CTDP1-202ENST00000299543 HOXD12P35452 270 aa13.71□□□□□ -0.22
CTDP1-202ENST00000299543 PAN2Q504Q3 1202 aaKnown RBP13.71□□□□□ -0.22
CTDP1-202ENST00000299543 RABGAP1LQ5R372 815 aa13.71□□□□□ -0.22
CTDP1-202ENST00000299543 FSTL4Q6MZW2 842 aa13.71□□□□□ -0.22
CTDP1-202ENST00000299543 TMEM40Q8WWA1 233 aa13.71□□□□□ -0.22
CTDP1-202ENST00000299543 ARMC7Q9H6L4 198 aa13.71□□□□□ -0.22
CTDP1-202ENST00000299543 KLHL2O95198 593 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 SNAI1O95863 264 aaPredicted RBP13.7□□□□□ -0.22
CTDP1-202ENST00000299543 PABPC4LP0CB38 370 aaKnown RBP13.7□□□□□ -0.22
CTDP1-202ENST00000299543 CNTFP26441 200 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 RAP1GDS1P52306 607 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 OXCT1P55809 520 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 ACTR3P61158 418 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 CD300CQ08708 224 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 MSLNQ13421 630 aaPredicted RBP13.7□□□□□ -0.22
CTDP1-202ENST00000299543 ANKDD1AQ495B1 522 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 ARHGAP17Q68EM7 881 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 LRRC52Q8N7C0 313 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 LINC01465Q8N7H1 131 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 ACVR1CQ8NER5 493 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 GAB3Q8WWW8 586 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 SGF29Q96ES7 293 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 COG4Q9H9E3 785 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 PLEKHA5Q9HAU0 1116 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 GMEB1Q9Y692 573 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 AK5Q9Y6K8 562 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 ANK1P16157 1881 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 A0A088AWK7 358 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 MMP3P08254 477 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 PEX2P28328 305 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 SPRP35270 261 aaPredicted RBP13.7□□□□□ -0.22
CTDP1-202ENST00000299543 NIPAL4Q0D2K0 466 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 CYLC2Q14093 348 aaPredicted RBP13.7□□□□□ -0.22
CTDP1-202ENST00000299543 TMEM53Q6P2H8 277 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 MAMDC4Q6UXC1 1216 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms