RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 IFT43Q96FT9 208 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 PCED1BQ96HM7 432 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 PPP1R10Q96QC0 940 aaKnown RBP13.9□□□□□ -0.18
BCCIP-202ENST00000299130 MCMBPQ9BTE3 642 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 GATA5Q9BWX5 397 aaPredicted RBP13.9□□□□□ -0.18
BCCIP-202ENST00000299130 GBA3Q9H227 469 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 CDH22Q9UJ99 828 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 ADAMTS6Q9UKP5 1117 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 ADAM28Q9UKQ2 775 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 GNEQ9Y223 722 aaKnown RBP13.9□□□□□ -0.18
BCCIP-202ENST00000299130 SBK3P0C264 359 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 MPSTP25325 297 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 CRABP2P29373 138 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 LRPAP1P30533 357 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 CDC42EP1Q00587 391 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 MPP3Q13368 585 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 GRM3Q14832 879 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 C9orf131Q5VYM1 1079 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 OLFML2BQ68BL8 750 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 FAM35AQ86V20 835 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 TMEM151AQ8N4L1 468 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 ZSCAN18Q8TBC5 510 aaPredicted RBP13.89□□□□□ -0.19
BCCIP-202ENST00000299130 ACTRT2Q8TDY3 377 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 SLC26A7Q8TE54 656 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 GTF3C2Q8WUA4 911 aaPredicted RBP13.89□□□□□ -0.19
BCCIP-202ENST00000299130 EBF3Q9H4W6 596 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 WDR55Q9H6Y2 383 aaPredicted RBP13.89□□□□□ -0.19
BCCIP-202ENST00000299130 SLC39A10Q9ULF5 831 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 ASB3Q9Y575 518 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 EME2A4GXA9 379 aaPredicted RBP13.89□□□□□ -0.19
BCCIP-202ENST00000299130 TK2O00142 265 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 JCHAINP01591 159 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 ZCCHC18P0CG32 403 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 COX4I1P13073 169 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 AVPR1AP37288 418 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 PSEN1P49768 467 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 DSG1Q02413 1049 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 BTKQ06187 659 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 SCAPQ12770 1279 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 TWF2Q6IBS0 349 aaKnown RBP13.89□□□□□ -0.19
BCCIP-202ENST00000299130 ARHGAP36Q6ZRI8 547 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 TDRD5Q8NAT2 981 aaKnown RBP13.89□□□□□ -0.19
BCCIP-202ENST00000299130 C3orf58Q8NDZ4 430 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 NTAN1Q96AB6 310 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 VPS39Q96JC1 886 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 SENP8Q96LD8 212 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 SLC9A7Q96T83 725 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 NMRAL1Q9HBL8 299 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 MIOSQ9NXC5 875 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 FLRT1Q9NZU1 646 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 SCOCQ9UIL1 159 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 G3BP2Q9UN86 482 aaKnown RBP13.89□□□□□ -0.19
BCCIP-202ENST00000299130 POMPQ9Y244 141 aa13.89□□□□□ -0.19
BCCIP-202ENST00000299130 MAGEA13PA6NCF6 341 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 HHLA1C9JL84 531 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 PHGDHO43175 533 aaKnown RBP13.88□□□□□ -0.19
BCCIP-202ENST00000299130 FKBP6O75344 327 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 YBX3P16989 372 aaKnown RBP eCLIP13.88□□□□□ -0.194e-8■■□□□ 13.2
BCCIP-202ENST00000299130 CDK7P50613 346 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 GALNT2Q10471 571 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 TBL3Q12788 808 aaKnown RBP13.88□□□□□ -0.19
BCCIP-202ENST00000299130 KLF10Q13118 480 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 PCBP1Q15365 356 aaKnown RBP eCLIP13.88□□□□□ -0.19
BCCIP-202ENST00000299130 SFT2D3Q587I9 215 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 PPM1LQ5SGD2 360 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 USP50Q70EL3 339 aaPredicted RBP13.88□□□□□ -0.19
BCCIP-202ENST00000299130 TLK2Q86UE8 772 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 CNTD1Q8N815 330 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 SPATA22Q8NHS9 363 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 HDAC11Q96DB2 347 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 ZNF419Q96HQ0 510 aaPredicted RBP13.88□□□□□ -0.19
BCCIP-202ENST00000299130 APBA2Q99767 749 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 COLEC11Q9BWP8 271 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 TKTL2Q9H0I9 626 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 OR12D3Q9UGF7 316 aa13.88□□□□□ -0.19
BCCIP-202ENST00000299130 NEMP1O14524 444 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 TRIM13O60858 407 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 LRIG2O94898 1065 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 MPOP05164 745 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 GABRB3P28472 473 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 SERPINB5P36952 375 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 GLRBP48167 497 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 PSEN2P49810 448 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 CLCNKBP51801 687 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 CFAP157Q5JU67 520 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 THEMIS2Q5TEJ8 643 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 PLEKHH3Q7Z736 793 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 DHDDSQ86SQ9 333 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 DPF3Q92784 378 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 LPPQ93052 612 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 CMTM5Q96DZ9 223 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 LENG8Q96PV6 779 aaPredicted RBP13.87□□□□□ -0.19
BCCIP-202ENST00000299130 TUBGCP5Q96RT8 1024 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 PAAF1Q9BRP4 392 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 C1QTNF1Q9BXJ1 281 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 UNKQ9C0B0 810 aaKnown RBP13.87□□□□□ -0.19
BCCIP-202ENST00000299130 TSPYL2Q9H2G4 693 aaPredicted RBP13.87□□□□□ -0.19
BCCIP-202ENST00000299130 VCXQ9H320 206 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 DNAJB4Q9UDY4 337 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 CDY2AQ9Y6F7 541 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms