RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 TTC17Q96AE7 1141 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 MAGEB18Q96M61 343 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 FCRL3Q96P31 734 aaPredicted RBP23.21■■□□□ 1.31
VSTM4-201ENST00000298454 FCRL5Q96RD9 977 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 TGS1Q96RS0 853 aaKnown RBP23.21■■□□□ 1.31
VSTM4-201ENST00000298454 CDK5RAP1Q96SZ6 601 aaKnown RBP23.21■■□□□ 1.31
VSTM4-201ENST00000298454 HSFX1Q9UBD0 423 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 ZNF212Q9UDV6 495 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 LAMA2P24043 3122 aaKnown RBP23.21■■□□□ 1.31
VSTM4-201ENST00000298454 J3KR12 359 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 ATP9BO43861 1147 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 PEX11BO96011 259 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 POLBP06746 335 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 SNRPAP09012 282 aaKnown RBP23.21■■□□□ 1.31
VSTM4-201ENST00000298454 PYGBP11216 843 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 FOXN2P32314 431 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 PLD1Q13393 1074 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 HECTD3Q5T447 861 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 GKAP1Q5VSY0 366 aaPredicted RBP23.21■■□□□ 1.31
VSTM4-201ENST00000298454 LRRC49Q8IUZ0 686 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 KLHDC8BQ8IXV7 354 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 OVCA2Q8WZ82 227 aa23.21■■□□□ 1.31
VSTM4-201ENST00000298454 EFCAB14O75071 495 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 KRT37O76014 449 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 TACR2P21452 398 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 NIPAL4Q0D2K0 466 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 RAB33AQ14088 237 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 ZNF276Q8N554 614 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 TCP10LQ8TDR4 215 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 ALKBH8Q96BT7 664 aaKnown RBP23.2■■□□□ 1.3
VSTM4-201ENST00000298454 AAR2Q9Y312 384 aaKnown RBP23.2■■□□□ 1.3
VSTM4-201ENST00000298454 HMX2A2RU54 273 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 HSPA8P11142 646 aaKnown RBP23.2■■□□□ 1.3
VSTM4-201ENST00000298454 NAPEPLDQ6IQ20 393 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 LVRNQ6Q4G3 990 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 CFAP52Q8N1V2 620 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 MYRFLQ96LU7 910 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 FGFR1OP2Q9NVK5 253 aa23.2■■□□□ 1.3
VSTM4-201ENST00000298454 PRRG1O14668 218 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 ZWINTO95229 277 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 SLC6A4P31645 630 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 TWF1Q12792 350 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 TAF12Q16514 161 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 LGSNQ5TDP6 509 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 RFWD3Q6PCD5 774 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 IPMKQ8NFU5 416 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 PSMG2Q969U7 264 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 KLHL5Q96PQ7 755 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 ELAC2Q9BQ52 826 aaKnown RBP23.19■■□□□ 1.3
VSTM4-201ENST00000298454 DONSONQ9NYP3 566 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 TRPM5Q9NZQ8 1165 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 SLC17A7Q9P2U7 560 aa23.19■■□□□ 1.3
VSTM4-201ENST00000298454 KIAA0100Q14667 2235 aaKnown RBP23.19■■□□□ 1.3
VSTM4-201ENST00000298454 ERVK-10P10266 1014 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 TAC1P20366 129 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 NUMBP49757 651 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 SLC18A2Q05940 514 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 CDH17Q12864 832 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 ZKSCAN8Q15776 578 aaPredicted RBP23.18■■□□□ 1.3
VSTM4-201ENST00000298454 ANO4Q32M45 955 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 SPANXN3Q5MJ09 141 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 MARK2Q7KZI7 788 aaKnown RBP23.18■■□□□ 1.3
VSTM4-201ENST00000298454 PIGWQ7Z7B1 504 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 ZNF354CQ86Y25 554 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 LGI2Q8N0V4 545 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 ZNF669Q96BR6 464 aaPredicted RBP23.18■■□□□ 1.3
VSTM4-201ENST00000298454 GKN1Q9NS71 199 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 DOCK4Q8N1I0 1966 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 PSMD3O43242 534 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 ACSL4O60488 711 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 LPXNO60711 386 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 KRT38O76015 456 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 ANXA9O76027 345 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 NEBLO76041 1014 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 ADRA1DP25100 572 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 OR1E1P30953 314 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 NPY2RP49146 381 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 FAM133BQ5BKY9 247 aaKnown RBP23.18■■□□□ 1.3
VSTM4-201ENST00000298454 ACBD5Q5T8D3 534 aaPredicted RBP23.18■■□□□ 1.3
VSTM4-201ENST00000298454 MROH9Q5TGP6 573 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 HHATQ5VTY9 493 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 TMEM135Q86UB9 458 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 CACNA2D3Q8IZS8 1091 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 CDKL2Q92772 493 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 PABPC5Q96DU9 382 aaKnown RBP23.18■■□□□ 1.3
VSTM4-201ENST00000298454 MFSD3Q96ES6 412 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 CERS2Q96G23 380 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 RNF38Q9H0F5 515 aa23.18■■□□□ 1.3
VSTM4-201ENST00000298454 MRPL17Q9NRX2 175 aaKnown RBP23.18■■□□□ 1.3
VSTM4-201ENST00000298454 C2orf78A6NCI8 922 aa23.17■■□□□ 1.3
VSTM4-201ENST00000298454 ANKRD65E5RJM6 399 aa23.17■■□□□ 1.3
VSTM4-201ENST00000298454 F5H5T6 163 aa23.17■■□□□ 1.3
VSTM4-201ENST00000298454 RAMP2O60895 175 aa23.17■■□□□ 1.3
VSTM4-201ENST00000298454 RFPL1O75677 317 aa23.17■■□□□ 1.3
VSTM4-201ENST00000298454 HARS2P49590 506 aaKnown RBP23.17■■□□□ 1.3
VSTM4-201ENST00000298454 SLC10A7Q0GE19 358 aa23.17■■□□□ 1.3
VSTM4-201ENST00000298454 POLD3Q15054 466 aaPredicted RBP23.17■■□□□ 1.3
VSTM4-201ENST00000298454 KLHDC10Q6PID8 442 aa23.17■■□□□ 1.3
VSTM4-201ENST00000298454 C16orf59Q7L2K0 433 aa23.17■■□□□ 1.3
VSTM4-201ENST00000298454 LINC00523Q86TU6 105 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms