RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 CPNE1Q99829 537 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 GLIS2Q9BZE0 524 aaPredicted RBP13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 TCRBV3S1A0A5B6 114 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 XPOTO43592 962 aaKnown RBP13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 MICAL2O94851 1124 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 PDGFRAP16234 1089 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 KCNA2P16389 499 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 UGT1A6P19224 532 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 UGT1A1P22309 533 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 UGT1A4P22310 534 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 SLC7A1P30825 629 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 UGT1A3P35503 534 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 UGT1A5P35504 534 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 RAP1GAPP47736 663 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 CDO1Q16878 200 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 BOLA3Q53S33 107 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 GRTP1Q5TC63 336 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 OGFOD2Q6N063 350 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 PPP4R4Q6NUP7 873 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 HERC6Q8IVU3 1022 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 QKIQ96PU8 341 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 NPLQ9BXD5 320 aaPredicted RBP13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 DRC3Q9H069 523 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 C20orf96Q9NUD7 363 aaPredicted RBP13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 TXNDC16Q9P2K2 825 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 GNPTGQ9UJJ9 305 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 CDYLQ9Y232 598 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 FAM32AQ9Y421 112 aaKnown RBP13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 PCDHGA7Q9Y5G6 932 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 SNX13Q9Y5W8 968 aa13.75□□□□□ -0.21
RPUSD4-201ENST00000298317 SULT1C4O75897 302 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 TOMM70O94826 608 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 STAMBPO95630 424 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 HSPA1AP0DMV8 641 aaKnown RBP13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 HSPA1BP0DMV9 641 aaKnown RBP13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 MGAT1P26572 445 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 ARL2P36404 184 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 GPD2P43304 727 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 GBE1Q04446 702 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 CA9Q16790 459 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 IRAK1BP1Q5VVH5 260 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 TTC30AQ86WT1 665 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 ANKFN1Q8N957 763 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 TNIP2Q8NFZ5 429 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 GPRASP2Q96D09 838 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 RBBP8Q99708 897 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 PCDHAC1Q9H158 963 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 CXorf21Q9HAI6 301 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 MRPL40Q9NQ50 206 aaKnown RBP13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 OXSMQ9NWU1 459 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 COPG1Q9Y678 874 aaKnown RBP13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 A0A1W2PPW3 197 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 ZNF487B1APH4 448 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 AKAP10O43572 662 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 HOXD11P31277 338 aaPredicted RBP13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 PSME3P61289 254 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 GALNT2Q10471 571 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 ORC1Q13415 861 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 CPXCR1Q8N123 301 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 TERB1Q8NA31 727 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 TANKQ92844 425 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 PIWIL1Q96J94 861 aaKnown RBP13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 NAT9Q9BTE0 207 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 SNRNP25Q9BV90 132 aaKnown RBP13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 TMEM134Q9H6X4 195 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 ADA2Q9NZK5 511 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 CNOT6Q9ULM6 557 aaKnown RBP13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 PTPRFP10586 1907 aa13.74□□□□□ -0.21
RPUSD4-201ENST00000298317 M0QYV0 167 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 POLRMTO00411 1230 aaKnown RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 TRIM24O15164 1050 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 ERVK-10P10266 1014 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 TFEBP19484 476 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 CD247P20963 164 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 CDH3P22223 829 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 MYF6P23409 242 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 TTKP33981 857 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 TRPC1P48995 793 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 LIMK2P53671 638 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 SESN2P58004 480 aaPredicted RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 IRF9Q00978 393 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 TRAP1Q12931 704 aaKnown RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 SMAD1Q15797 465 aaKnown RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 MOGQ16653 247 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 CCDC14Q49A88 953 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 XKR3Q5GH77 459 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 AARS2Q5JTZ9 985 aaKnown RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 XKR5Q6UX68 686 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 ZBTB49Q6ZSB9 765 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 CHSY3Q70JA7 882 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 ZNF354CQ86Y25 554 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 CERS2Q96G23 380 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 MARK4Q96L34 752 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 TWNKQ96RR1 684 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 TBCBQ99426 244 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 BCO2Q9BYV7 579 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 ARMC7Q9H6L4 198 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 NMRAL1Q9HBL8 299 aa13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 RAVER2Q9HCJ3 691 aaKnown RBP13.73□□□□□ -0.21
RPUSD4-201ENST00000298317 EIF2B3Q9NR50 452 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms