RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 SLC44A3Q8N4M1 653 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 CPA6Q8N4T0 437 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 NAT16Q8N8M0 369 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 ARHGEF2Q92974 986 aaKnown RBP18.2■□□□□ 0.5
CCDC78-201ENST00000293889 NXPE3Q969Y0 559 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 KRT12Q99456 494 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 COL25A1Q9BXS0 654 aaPredicted RBP18.2■□□□□ 0.5
CCDC78-201ENST00000293889 MAGEH1Q9H213 219 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 MUTYHQ9UIF7 546 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 HPCAL4Q9UM19 191 aa18.2■□□□□ 0.5
CCDC78-201ENST00000293889 ARHGAP42A6NI28 874 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 NCAM2O15394 837 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 CHRNA3P32297 505 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 NUMBP49757 651 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 GAB4Q2WGN9 574 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 GLE1Q53GS7 698 aaKnown RBP18.19■□□□□ 0.5
CCDC78-201ENST00000293889 ASTLQ6HA08 431 aaPredicted RBP18.19■□□□□ 0.5
CCDC78-201ENST00000293889 DARS2Q6PI48 645 aaKnown RBP18.19■□□□□ 0.5
CCDC78-201ENST00000293889 CCDC137Q6PK04 289 aaKnown RBP18.19■□□□□ 0.5
CCDC78-201ENST00000293889 ZNF783Q6ZMS7 281 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 CCNYQ8ND76 341 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 OR7D4Q8NG98 312 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 TTC8Q8TAM2 541 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 AENQ8WTP8 325 aaKnown RBP18.19■□□□□ 0.5
CCDC78-201ENST00000293889 LMLNQ96KR4 655 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 QKIQ96PU8 341 aaKnown RBP eCLIP18.19■□□□□ 0.5
CCDC78-201ENST00000293889 BRD9Q9H8M2 597 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 GTSE1Q9NYZ3 720 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 ZNF148Q9UQR1 794 aa18.19■□□□□ 0.5
CCDC78-201ENST00000293889 DRG1Q9Y295 367 aaKnown RBP18.19■□□□□ 0.5
CCDC78-201ENST00000293889 TICRRQ7Z2Z1 1910 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 HACD1B0YJ81 288 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 PPP1R12AO14974 1030 aaPredicted RBP18.18■□□□□ 0.5
CCDC78-201ENST00000293889 NARSO43776 548 aaKnown RBP18.18■□□□□ 0.5
CCDC78-201ENST00000293889 CACNG3O60359 315 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 MZF1P28698 734 aaPredicted RBP18.18■□□□□ 0.5
CCDC78-201ENST00000293889 CD70P32970 193 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 CSKP41240 450 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 FNTAP49354 379 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 PPIDQ08752 370 aaKnown RBP18.18■□□□□ 0.5
CCDC78-201ENST00000293889 LMAN2Q12907 356 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 SERINC3Q13530 473 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 PRKD1Q15139 912 aaPredicted RBP18.18■□□□□ 0.5
CCDC78-201ENST00000293889 HSP90B2PQ58FF3 399 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 SLC45A4Q5BKX6 768 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 C12orf40Q86WS4 652 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 ATPAF2Q8N5M1 289 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 TFB1MQ8WVM0 346 aaKnown RBP18.18■□□□□ 0.5
CCDC78-201ENST00000293889 HDAC11Q96DB2 347 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 FEM1AQ9BSK4 669 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 TMEM121Q9BTD3 319 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 SPON2Q9BUD6 331 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 MUC3BQ9H195 1237 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 KIAA1522Q9P206 1035 aaPredicted RBP18.18■□□□□ 0.5
CCDC78-201ENST00000293889 OR51B4Q9Y5P0 310 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 COL4A2P08572 1712 aa18.18■□□□□ 0.5
CCDC78-201ENST00000293889 BCLAF3A2AJT9 711 aaKnown RBP18.17■□□□□ 0.5
CCDC78-201ENST00000293889 MAFKO60675 156 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 ITGAVP06756 1048 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 HLA-FP30511 346 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 HNRNPH2P55795 449 aaKnown RBP18.17■□□□□ 0.5
CCDC78-201ENST00000293889 AP1B1Q10567 949 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 NR1H3Q13133 447 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 TDGQ13569 410 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 KCTD19Q17RG1 926 aaPredicted RBP18.17■□□□□ 0.5
CCDC78-201ENST00000293889 ZNF354CQ86Y25 554 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 LRRC49Q8IUZ0 686 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 CDKL3Q8IVW4 592 aaPredicted RBP18.17■□□□□ 0.5
CCDC78-201ENST00000293889 ETFBKMTQ8IXQ9 262 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 CCDC105Q8IYK2 499 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 ATL2Q8NHH9 583 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 ALG14Q96F25 216 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 TSGA13Q96PP4 275 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 XPO6Q96QU8 1125 aaKnown RBP18.17■□□□□ 0.5
CCDC78-201ENST00000293889 SLC2A11Q9BYW1 496 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 BRD8Q9H0E9 1235 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 ABCB8Q9NUT2 735 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 PCYOX1Q9UHG3 505 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 AMACRQ9UHK6 382 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 IPO11Q9UI26 975 aaKnown RBP18.17■□□□□ 0.5
CCDC78-201ENST00000293889 FBXO10Q9UK96 956 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 SORCS3Q9UPU3 1222 aa18.17■□□□□ 0.5
CCDC78-201ENST00000293889 CHD5Q8TDI0 1954 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 TRIM24O15164 1050 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 SYF2O95926 243 aaKnown RBP18.16■□□□□ 0.5
CCDC78-201ENST00000293889 VAV1P15498 845 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 RBL1P28749 1068 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 OXCT1P55809 520 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 ITPRIPL2Q3MIP1 535 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 IL31Q6EBC2 164 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 APCDD1Q8J025 514 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 CCDC114Q96M63 670 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 ACE2Q9BYF1 805 aaPredicted RBP18.16■□□□□ 0.5
CCDC78-201ENST00000293889 USP29Q9HBJ7 922 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 ATP13A1Q9HD20 1204 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 DNAJC17Q9NVM6 304 aaKnown RBP18.16■□□□□ 0.5
CCDC78-201ENST00000293889 NYNRINQ9P2P1 1898 aaKnown RBP18.16■□□□□ 0.5
CCDC78-201ENST00000293889 ERICH4A6NGS2 130 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 J3KR12 359 aa18.16■□□□□ 0.5
CCDC78-201ENST00000293889 TULP3O75386 442 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms