RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TMEM237Q96Q45 408 aa17.2■□□□□ 0.34
CPSF4-201ENST00000292476 LRRC37BQ96QE4 947 aa17.2■□□□□ 0.34
CPSF4-201ENST00000292476 KLC2Q9H0B6 622 aa17.2■□□□□ 0.34
CPSF4-201ENST00000292476 ZBP1Q9H171 429 aa17.2■□□□□ 0.34
CPSF4-201ENST00000292476 SFMBT1Q9UHJ3 866 aa17.2■□□□□ 0.34
CPSF4-201ENST00000292476 IKBKGQ9Y6K9 419 aa17.2■□□□□ 0.34
CPSF4-201ENST00000292476 FGF10O15520 208 aaPredicted RBP17.19■□□□□ 0.34
CPSF4-201ENST00000292476 SOAT2O75908 522 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 STK10O94804 968 aaKnown RBP17.19■□□□□ 0.34
CPSF4-201ENST00000292476 MT-ND3P03897 115 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 DHRS4L1P0CG22 281 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 MX2P20592 715 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 CTNNB1P35222 781 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 ELK3P41970 407 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 EPHB3P54753 998 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 KCNJ2P63252 427 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 RING1Q06587 406 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 EFTUD2Q15029 972 aaKnown RBP eCLIP17.19■□□□□ 0.343e-13■■■■□ 21.2
CPSF4-201ENST00000292476 TRIP4Q15650 581 aaPredicted RBP17.19■□□□□ 0.34
CPSF4-201ENST00000292476 NPNTQ6UXI9 565 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 GPR152Q8TDT2 470 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 APOPT1Q96IL0 206 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 CATSPERBQ9H7T0 1116 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 C10orf88Q9H8K7 445 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 BAIAP2L1Q9UHR4 511 aa17.19■□□□□ 0.34
CPSF4-201ENST00000292476 MAGED2Q9UNF1 606 aaPredicted RBP17.19■□□□□ 0.34
CPSF4-201ENST00000292476 TCRBV9S1A1TA0A576 114 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 VGLL3A8MV65 326 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 LILRB3O75022 631 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 INHBAP08476 426 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 LINC00271P0C7V0 271 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 BMPR1AP36894 532 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 RASSF2P50749 326 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 NEK3P51956 506 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 C10orf120Q5SQS8 335 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 KLHDC10Q6PID8 442 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 LZTR1Q8N653 840 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 TFB1MQ8WVM0 346 aaKnown RBP17.18■□□□□ 0.34
CPSF4-201ENST00000292476 SLC39A13Q96H72 371 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 ZNF512Q96ME7 567 aaPredicted RBP17.18■□□□□ 0.34
CPSF4-201ENST00000292476 EMILIN2Q9BXX0 1053 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 OSER1Q9NX31 292 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 MKS1Q9NXB0 559 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 DTLQ9NZJ0 730 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 TRPM5Q9NZQ8 1165 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 MARCH2Q9P0N8 246 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 RPL26L1Q9UNX3 145 aaKnown RBP17.18■□□□□ 0.34
CPSF4-201ENST00000292476 CHMP2BQ9UQN3 213 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 CHKBQ9Y259 395 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 HBS1LQ9Y450 684 aaKnown RBP17.18■□□□□ 0.34
CPSF4-201ENST00000292476 YIPF1Q9Y548 306 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 ASB3Q9Y575 518 aa17.18■□□□□ 0.34
CPSF4-201ENST00000292476 KCNU1A8MYU2 1149 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 DCLK1O15075 740 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 MTSS1O43312 755 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 ADH1AP07327 375 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 ERCC2P18074 760 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 CCND1P24385 295 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 EPHB2P29323 1055 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 ATP5C1P36542 298 aaKnown RBP17.17■□□□□ 0.34
CPSF4-201ENST00000292476 TUBP50607 506 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 UBE3AQ05086 875 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 EFEMP1Q12805 493 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 HEATR6Q6AI08 1181 aaKnown RBP17.17■□□□□ 0.34
CPSF4-201ENST00000292476 CCDC149Q6ZUS6 474 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 OTOAQ7RTW8 1153 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 TMC7Q7Z402 723 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 KLHL23Q8NBE8 558 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 BTN2A3PQ96KV6 586 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 QKIQ96PU8 341 aaKnown RBP eCLIP17.17■□□□□ 0.34
CPSF4-201ENST00000292476 MYLK2Q9H1R3 596 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 SAR1AQ9NR31 198 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 GGT7Q9UJ14 662 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 IRAK3Q9Y616 596 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 MYO16Q9Y6X6 1858 aa17.17■□□□□ 0.34
CPSF4-201ENST00000292476 TRAFD1O14545 582 aaPredicted RBP17.16■□□□□ 0.34
CPSF4-201ENST00000292476 KCNN4O15554 427 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 TLR5O60602 858 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 LPXNO60711 386 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 PAGE1O75459 146 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 LRIG2O94898 1065 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 TGDSO95455 350 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 SEC24AO95486 1093 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 TPSB2P20231 275 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 PRKCHP24723 683 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 GBE1Q04446 702 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 TPSAB1Q15661 275 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 PABPC1LQ4VXU2 614 aaKnown RBP17.16■□□□□ 0.34
CPSF4-201ENST00000292476 LGSNQ5TDP6 509 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 TTC39BQ5VTQ0 682 aaPredicted RBP17.16■□□□□ 0.34
CPSF4-201ENST00000292476 SH2D5Q6ZV89 423 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 RTL10Q7L3V2 364 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 SLC26A11Q86WA9 606 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 TCP10LQ8TDR4 215 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 SPOCK2Q92563 424 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 ERP27Q96DN0 273 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 TBC1D31Q96DN5 1066 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 SAMD11Q96NU1 681 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 OLFM3Q96PB7 478 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 SLCO1B3Q9NPD5 702 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms