RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 DNAJB3Q8WWF6 145 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 NACC2Q96BF6 587 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 INVSQ9Y283 1065 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 TCRBV9S1A1TA0A576 114 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 PEX11AO75192 247 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 PSME3P61289 254 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 FSTL1Q12841 308 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 STARD3Q14849 445 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 MTX3Q5HYI7 312 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 ZDHHC13Q8IUH4 622 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 SLC25A23Q9BV35 468 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 SNRNP25Q9BV90 132 aaKnown RBP15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 LRRC4CQ9HCJ2 640 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 C6orf203Q9P0P8 240 aaPredicted RBP15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 NFICP08651 508 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 TGFB2P61812 414 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 CSNK2BP67870 215 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 TMEM63BQ5T3F8 832 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 ARIH1Q9Y4X5 557 aaPredicted RBP15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 KRT87PA6NCN2 255 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 NOL4O94818 638 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 HNRNPLP14866 589 aaKnown RBP eCLIP15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 HIRAP54198 1017 aaPredicted RBP15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 CNTN2Q02246 1040 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 CWF19L1Q69YN2 538 aaKnown RBP15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 MILR1Q7Z6M3 343 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 C8orf59Q8N0T1 100 aaPredicted RBP15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 SVOPQ8N4V2 548 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 FITM2Q8N6M3 262 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 EGFL7Q9UHF1 273 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 MOXD2PA6NHM9 499 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 NCAM2O15394 837 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 CCDC166P0CW27 439 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 ARMC3Q5W041 872 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 METTL7BQ6UX53 244 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 SPATA20Q8TB22 786 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 C1orf50Q9BV19 199 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 RBMX2Q9Y388 322 aaKnown RBP15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 HACD1B0YJ81 288 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 SHOX2O60902 331 aaPredicted RBP15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 HGSNATQ68CP4 663 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 ELMSAN1Q6PJG2 1045 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 YAF2Q8IY57 180 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 GIPC3Q8TF64 312 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 CERS2Q96G23 380 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 MTG1Q9BT17 334 aaPredicted RBP15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 TRIM39Q9HCM9 518 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 SPATA31C1P0DKV0 1188 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 CYP4F2P78329 520 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 CYP4F3Q08477 520 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 PARP6Q2NL67 630 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 CTXN3Q4LDR2 81 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 TRIQKQ629K1 86 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 RASGEF1CQ8N431 466 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 PARK7Q99497 189 aaKnown RBP15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 UGT2B28Q9BY64 529 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 ENTPD7Q9NQZ7 604 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 TRPC4Q9UBN4 977 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 RSL24D1Q9UHA3 163 aaKnown RBP15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 AGLP35573 1532 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 GSC2O15499 205 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 PAPSS1O43252 624 aaPredicted RBP15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 LCA5LO95447 670 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 ITGALP20701 1170 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 OR1E1P30953 314 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 HNRNPH3P31942 346 aaKnown RBP15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 LHX1P48742 406 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 GRIK4Q16099 956 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 FGD3Q5JSP0 725 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 OR56A4Q8NGH8 313 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 TBCBQ99426 244 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 ABCG8Q9H221 673 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 POLR1BQ9H9Y6 1135 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 VPS45Q9NRW7 570 aa15.56■□□□□ 0.08
SHROOM4-201ENST00000289292 MED26O95402 600 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 ATP5BP06576 529 aaKnown RBP15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 PAEPP09466 180 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 ST13P50502 369 aaKnown RBP15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 GRIK3Q13003 919 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 UGCGQ16739 394 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 C6orf52Q5T4I8 152 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 C16orf59Q7L2K0 433 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 PSTKQ8IV42 348 aaKnown RBP15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 DLG3Q92796 817 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 APOL4Q9BPW4 351 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 TGFB1I1O43294 461 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 ATG14Q6ZNE5 492 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 RAET1EQ8TD07 263 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 ZFP42Q96MM3 310 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 ABCB10Q9NRK6 738 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 ATP6AP2A0A1C7CYW4 349 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 ATP6AP2O75787 350 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 PRKAA2P54646 552 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 ZNF621Q6ZSS3 439 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 CMC1Q7Z7K0 106 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 CYP4Z1Q86W10 505 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 RMI1Q9H9A7 625 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 HMG20AQ9NP66 347 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 AK5Q9Y6K8 562 aa15.55■□□□□ 0.08
SHROOM4-201ENST00000289292 A0A0A0MRY4 1105 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms