RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 FTHL17Q9BXU8 183 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 C20orf96Q9NUD7 363 aaPredicted RBP19.66■□□□□ 0.74
BRAF-201ENST00000288602 SIRPGQ9P1W8 387 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 USP1O94782 785 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 KCNA4P22459 653 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 TYK2P29597 1187 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 HOXC13P31276 330 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 GP5P40197 560 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 SLC11A1P49279 550 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 MLLT6P55198 1093 aaPredicted RBP19.65■□□□□ 0.74
BRAF-201ENST00000288602 PRPSAP1Q14558 356 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 MGAT5BQ3V5L5 792 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 TEDDM1Q5T9Z0 273 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 TAS1R1Q7RTX1 841 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 C8orf48Q96LL4 319 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 MARCH5Q9NX47 278 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 ERI2A8K979 691 aaKnown RBP19.65■□□□□ 0.74
BRAF-201ENST00000288602 FGF10O15520 208 aaPredicted RBP19.65■□□□□ 0.74
BRAF-201ENST00000288602 CNTN5O94779 1100 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 GSRP00390 522 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 HLA-DQB2P05538 268 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 BPGMP07738 259 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 MYL2P10916 166 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 SERPINB3P29508 390 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 TBX4P57082 545 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 RPL10AP62906 217 aaKnown RBP19.65■□□□□ 0.74
BRAF-201ENST00000288602 CDH17Q12864 832 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 POU6F1Q14863 301 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 DLG2Q15700 870 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 RTP2Q5QGT7 225 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 KCNMB4Q86W47 210 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 DCLK2Q8N568 766 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 ACVR1CQ8NER5 493 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 ATP2A3Q93084 1043 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 SCLYQ96I15 445 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 FUBP3Q96I24 572 aaKnown RBP eCLIP19.65■□□□□ 0.74
BRAF-201ENST00000288602 CD248Q9HCU0 757 aa19.65■□□□□ 0.74
BRAF-201ENST00000288602 IARS2Q9NSE4 1012 aaKnown RBP19.65■□□□□ 0.74
BRAF-201ENST00000288602 CFAP73A6NFT4 308 aa19.64■□□□□ 0.74
BRAF-201ENST00000288602 SYN3O14994 580 aa19.64■□□□□ 0.74
BRAF-201ENST00000288602 MGRN1O60291 552 aa19.64■□□□□ 0.74
BRAF-201ENST00000288602 PMPCBO75439 489 aa19.64■□□□□ 0.74
BRAF-201ENST00000288602 ALDH2P05091 517 aa19.64■□□□□ 0.74
BRAF-201ENST00000288602 FSTL4Q6MZW2 842 aa19.64■□□□□ 0.74
BRAF-201ENST00000288602 RNF19BQ6ZMZ0 732 aa19.64■□□□□ 0.74
BRAF-201ENST00000288602 RTL3Q8N8U3 475 aaKnown RBP19.64■□□□□ 0.74
BRAF-201ENST00000288602 TSGA13Q96PP4 275 aa19.64■□□□□ 0.74
BRAF-201ENST00000288602 CPNE1Q99829 537 aa19.64■□□□□ 0.74
BRAF-201ENST00000288602 FBXO44Q9H4M3 255 aa19.64■□□□□ 0.74
BRAF-201ENST00000288602 ARHGEF3Q9NR81 526 aa19.64■□□□□ 0.74
BRAF-201ENST00000288602 RBM22Q9NW64 420 aaKnown RBP eCLIP19.64■□□□□ 0.74
BRAF-201ENST00000288602 TLR6Q9Y2C9 796 aa19.64■□□□□ 0.74
BRAF-201ENST00000288602 KLF11O14901 512 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 MATN3O15232 486 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 FASTKD1Q53R41 847 aaKnown RBP19.64■□□□□ 0.73
BRAF-201ENST00000288602 ALFQ53S48 1182 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 RASIP1Q5U651 963 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 NAPEPLDQ6IQ20 393 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 CLNKQ7Z7G1 428 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 ARID3BQ8IVW6 561 aaPredicted RBP19.64■□□□□ 0.73
BRAF-201ENST00000288602 FBXO32Q969P5 355 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 SLC39A13Q96H72 371 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 RBBP8Q99708 897 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 FICDQ9BVA6 458 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 IL22Q9GZX6 179 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 NOL6Q9H6R4 1146 aaKnown RBP19.64■□□□□ 0.73
BRAF-201ENST00000288602 GLOD4Q9HC38 313 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 SNX15Q9NRS6 342 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 TMEM216Q9P0N5 145 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 BAIAP2L1Q9UHR4 511 aa19.64■□□□□ 0.73
BRAF-201ENST00000288602 MTO1Q9Y2Z2 717 aaKnown RBP19.64■□□□□ 0.73
BRAF-201ENST00000288602 VNN2O95498 520 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 TAF10Q12962 218 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 ZNF280DQ6N043 979 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 GIPC2Q8TF65 315 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 IL12RB2Q99665 862 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 LRFN2Q9ULH4 789 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 LAMA3Q16787 3333 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 LYPLA1O75608 230 aaPredicted RBP19.63■□□□□ 0.73
BRAF-201ENST00000288602 PRKCGP05129 697 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 YWHAQP27348 245 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 NPY2RP49146 381 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 MRPL58Q14197 206 aaKnown RBP19.63■□□□□ 0.73
BRAF-201ENST00000288602 MS4A13Q5J8X5 152 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 GRTP1Q5TC63 336 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 PRSS55Q6UWB4 352 aaPredicted RBP19.63■□□□□ 0.73
BRAF-201ENST00000288602 TTC7BQ86TV6 843 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 CIR1Q86X95 450 aaPredicted RBP19.63■□□□□ 0.73
BRAF-201ENST00000288602 FAM126BQ8IXS8 530 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 PLD6Q8N2A8 252 aaKnown RBP19.63■□□□□ 0.73
BRAF-201ENST00000288602 TBL1YQ9BQ87 522 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 TXLNGQ9NUQ3 528 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 SOX13Q9UN79 622 aa19.63■□□□□ 0.73
BRAF-201ENST00000288602 TTC24A2A3L6 582 aaPredicted RBP19.62■□□□□ 0.73
BRAF-201ENST00000288602 TGDSO95455 350 aa19.62■□□□□ 0.73
BRAF-201ENST00000288602 MAXP61244 160 aa19.62■□□□□ 0.73
BRAF-201ENST00000288602 IRF9Q00978 393 aa19.62■□□□□ 0.73
BRAF-201ENST00000288602 OCRLQ01968 901 aa19.62■□□□□ 0.73
BRAF-201ENST00000288602 DUSP4Q13115 394 aa19.62■□□□□ 0.73
BRAF-201ENST00000288602 PCSK7Q16549 785 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms