RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 CAPN10Q9HC96 672 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 LRRC4CQ9HCJ2 640 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 TLR8Q9NR97 1041 aaKnown RBP7.06□□□□□ -1.28
VPS8-201ENST00000287546 APOBEC2Q9Y235 224 aaKnown RBP7.06□□□□□ -1.28
VPS8-201ENST00000287546 TIMM13Q9Y5L4 95 aaPredicted RBP7.06□□□□□ -1.28
VPS8-201ENST00000287546 GOLGA8RI6L899 631 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 ATP9BO43861 1147 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 PARNO95453 639 aaKnown RBP7.06□□□□□ -1.28
VPS8-201ENST00000287546 HSPA4LO95757 839 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 MLYCDO95822 493 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 USP17L7P0C7H9 530 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 CKBP12277 381 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 GRK2P25098 689 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 ADRA1BP35368 520 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 CDH17Q12864 832 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 STX3Q13277 289 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 MOGSQ13724 837 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 CAPRIN1Q14444 709 aaKnown RBP7.06□□□□□ -1.28
VPS8-201ENST00000287546 PKN2Q16513 984 aaKnown RBP7.06□□□□□ -1.28
VPS8-201ENST00000287546 CCL14Q16627 93 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 VSTM1Q6UX27 236 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 SLC24A5Q71RS6 500 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 FBXO22Q8NEZ5 403 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 FLCNQ8NFG4 579 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 TTC8Q8TAM2 541 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 ZNF398Q8TD17 642 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 E2F7Q96AV8 911 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 FANCEQ9HB96 536 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 TBC1D13Q9NVG8 400 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 PCDHGA4Q9Y5G9 962 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 OR6C75A6NL08 312 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 CHUKO15111 745 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 BDNFP23560 247 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 SERPINB8P50452 374 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 RAP1GDS1P52306 607 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 MRPS15P82914 257 aaKnown RBP7.06□□□□□ -1.28
VPS8-201ENST00000287546 RHBDF2Q6PJF5 856 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 NPNTQ6UXI9 565 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 FIBCD1Q8N539 461 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 TEX9Q8N6V9 391 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.06□□□□□ -1.28
VPS8-201ENST00000287546 EBNA1BP2Q99848 306 aaKnown RBP7.06□□□□□ -1.28
VPS8-201ENST00000287546 SIKE1Q9BRV8 207 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 PRKD2Q9BZL6 878 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 TKTL2Q9H0I9 626 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 CCDC134Q9H6E4 229 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 EIF2B3Q9NR50 452 aaKnown RBP7.06□□□□□ -1.28
VPS8-201ENST00000287546 SLC39A10Q9ULF5 831 aa7.06□□□□□ -1.28
VPS8-201ENST00000287546 SF3B1O75533 1304 aaKnown RBP eCLIP7.06□□□□□ -1.281e-6■■■■■ 144
VPS8-201ENST00000287546 ZSCAN9O15535 394 aaPredicted RBP7.05□□□□□ -1.28
VPS8-201ENST00000287546 MAGEC1O60732 1142 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 COL6A1P12109 1028 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 DRD4P21917 467 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 IL1R2P27930 398 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 HOXA11P31270 313 aaPredicted RBP7.05□□□□□ -1.28
VPS8-201ENST00000287546 ETFBP38117 255 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 GP5P40197 560 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 ACTN3Q08043 901 aaPredicted RBP7.05□□□□□ -1.28
VPS8-201ENST00000287546 KCNA10Q16322 511 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 C7orf61Q8IZ16 206 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 B3GNT5Q9BYG0 378 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 TXLNGYQ9BZA5 131 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 OSBPL6Q9BZF3 934 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 GOLGA2P5Q9HBQ8 144 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 ZNF304Q9HCX3 659 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 OR12D3Q9UGF7 316 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 VANGL2Q9ULK5 521 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 TRIM33Q9UPN9 1127 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 STARD13Q9Y3M8 1113 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 EVPLQ92817 2033 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 SCN4AP35499 1836 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 ARL5CA6NH57 179 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 GOT1P17174 413 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 SP100P23497 879 aaPredicted RBP7.05□□□□□ -1.28
VPS8-201ENST00000287546 DAOAP59103 153 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 POLD3Q15054 466 aaPredicted RBP7.05□□□□□ -1.28
VPS8-201ENST00000287546 PDK4Q16654 411 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 SYCP2LQ5T4T6 812 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 GRTP1Q5TC63 336 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 TBC1D1Q86TI0 1168 aaPredicted RBP7.05□□□□□ -1.28
VPS8-201ENST00000287546 RIPOR3Q96MK2 946 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 DPEP3Q9H4B8 488 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 RXFP1Q9HBX9 757 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 PNPLA8Q9NP80 782 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 ZNF180Q9UJW8 692 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 C5orf58C9J3I9 102 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 HAS3O00219 553 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 SNX3O60493 162 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 MAP3K6O95382 1288 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 IQCF3P0C7M6 154 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 MBL2P11226 248 aaPredicted RBP7.05□□□□□ -1.28
VPS8-201ENST00000287546 HCAR3P49019 387 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 SLC11A2P49281 568 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 RENBPP51606 427 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 GTF2A1P52655 376 aaPredicted RBP7.05□□□□□ -1.28
VPS8-201ENST00000287546 PRAMEP78395 509 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 SLC9A4Q6AI14 798 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 ZCCHC8Q6NZY4 707 aaKnown RBP7.05□□□□□ -1.28
VPS8-201ENST00000287546 NRSN1Q8IZ57 195 aa7.05□□□□□ -1.28
VPS8-201ENST00000287546 NAT8LQ8N9F0 302 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms