RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 COPEO14579 308 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 CNTN5O94779 1100 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 DNAJB2P25686 324 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 RFC2P35250 354 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 CCNFP41002 786 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 KPNA1P52294 538 aaPredicted RBP9.78□□□□□ -0.84
TRIM55-201ENST00000276573 ANKRD20A4Q4UJ75 823 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 LACTB2Q53H82 288 aaPredicted RBP9.78□□□□□ -0.84
TRIM55-201ENST00000276573 ALFQ53S48 1182 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 MROH9Q5TGP6 573 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 RAP1GAP2Q684P5 730 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 NAPEPLDQ6IQ20 393 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 KIAA1841Q6NSI8 718 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 FBXL22Q6P050 247 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 PACS1Q6VY07 963 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 SPATA22Q8NHS9 363 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 SPOCK2Q92563 424 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 IGSF8Q969P0 613 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 ZNF689Q96CS4 500 aaPredicted RBP9.78□□□□□ -0.84
TRIM55-201ENST00000276573 APOL2Q9BQE5 337 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 IPO11Q9UI26 975 aaKnown RBP9.78□□□□□ -0.84
TRIM55-201ENST00000276573 PHTF1Q9UMS5 762 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 STARD13Q9Y3M8 1113 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 GREB1Q4ZG55 1949 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 ZCWPW2A0A1B0GU75 182 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 ATP9BO43861 1147 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 TLR5O60602 858 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 EDF1O60869 148 aaKnown RBP9.77□□□□□ -0.84
TRIM55-201ENST00000276573 ANXA9O76027 345 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 USP1O94782 785 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 ABLIM3O94929 683 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 SEC24AO95486 1093 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 ERVK-10P10266 1014 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 TPH1P17752 444 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 GEMP55040 296 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 CDH17Q12864 832 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 MTA1Q13330 715 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 ANO4Q32M45 955 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 SNX30Q5VWJ9 437 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 CDHR3Q6ZTQ4 885 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 FAM47EQ6ZV65 393 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.77□□□□□ -0.84
TRIM55-201ENST00000276573 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.77□□□□□ -0.84
TRIM55-201ENST00000276573 DIS3LQ8TF46 1054 aaKnown RBP9.77□□□□□ -0.84
TRIM55-201ENST00000276573 FATE1Q969F0 183 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 ZNF669Q96BR6 464 aaPredicted RBP9.77□□□□□ -0.84
TRIM55-201ENST00000276573 CERS2Q96G23 380 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 ZNF419Q96HQ0 510 aaPredicted RBP9.77□□□□□ -0.84
TRIM55-201ENST00000276573 PPP1R2P1Q96PQ5 205 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 FAM111AQ96PZ2 611 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 SRPK1Q96SB4 655 aaKnown RBP9.77□□□□□ -0.84
TRIM55-201ENST00000276573 CDK5RAP1Q96SZ6 601 aaKnown RBP9.77□□□□□ -0.84
TRIM55-201ENST00000276573 IL22Q9GZX6 179 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 MKS1Q9NXB0 559 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 AFF4Q9UHB7 1163 aaKnown RBP9.77□□□□□ -0.84
TRIM55-201ENST00000276573 ARL2BPQ9Y2Y0 163 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 PLLPQ9Y342 182 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 HBS1LQ9Y450 684 aaKnown RBP9.77□□□□□ -0.84
TRIM55-201ENST00000276573 SHROOM3Q8TF72 1996 aa9.77□□□□□ -0.84
TRIM55-201ENST00000276573 ABHD14A-ACY1A0A1B0GW23 586 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 C2CD2LO14523 706 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 PEX11BO96011 259 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 MT-CYBP00156 380 aaPredicted RBP9.77□□□□□ -0.85
TRIM55-201ENST00000276573 SOD2P04179 222 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 HLA-DQB2P05538 268 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 CRHR1P34998 444 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 ADRA1AP35348 466 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 ATP5C1P36542 298 aaKnown RBP9.77□□□□□ -0.85
TRIM55-201ENST00000276573 HNRNPDQ14103 355 aaKnown RBP9.77□□□□□ -0.85
TRIM55-201ENST00000276573 SPOUT1Q5T280 376 aaKnown RBP9.77□□□□□ -0.85
TRIM55-201ENST00000276573 GRTP1Q5TC63 336 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 NADSYN1Q6IA69 706 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 DENND5AQ6IQ26 1287 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 TRPM8Q7Z2W7 1104 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 TFAP2DQ7Z6R9 452 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 CHSY1Q86X52 802 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 CNPY4Q8N129 248 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 ZNF461Q8TAF7 563 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 OVCA2Q8WZ82 227 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 HMCESQ96FZ2 354 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 TBL1YQ9BQ87 522 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 PLCD4Q9BRC7 762 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 MANSC1Q9H8J5 431 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 SLCO1B3Q9NPD5 702 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 CHRAC1Q9NRG0 131 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 SLC17A6Q9P2U8 582 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 HSFX1Q9UBD0 423 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 ZNF212Q9UDV6 495 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 DNMT3LQ9UJW3 386 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 SOX13Q9UN79 622 aa9.77□□□□□ -0.85
TRIM55-201ENST00000276573 MICAL3Q7RTP6 2002 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 J3KR12 359 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 CLTBP09497 229 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 HMGA1P17096 107 aaKnown RBP9.76□□□□□ -0.85
TRIM55-201ENST00000276573 MAGEA9P43362 315 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 RENBPP51606 427 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 KCNQ1P51787 676 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 DSG1Q02413 1049 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 C5orf22Q49AR2 442 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 TPGS2Q68CL5 300 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms