RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 SELENOOQ9BVL4 669 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 BTBD1Q9H0C5 482 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 TMEM51Q9NW97 253 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 VPS28Q9UK41 221 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 A0A1B0GVT2 93 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 A0A1W2PP55 124 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 SIGLEC16A6NMB1 481 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 FAM72CH0Y354 149 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 BCAT2O15382 392 aaPredicted RBP14.8□□□□□ -0.04
HMGN3-201ENST00000275036 ATP9BO43861 1147 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 MT-CO1P00395 513 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 SYPP08247 313 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 GPD1P21695 349 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 GLDCP23378 1020 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 ADRA1BP35368 520 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 PSMD8P48556 350 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 RPL7AP62424 266 aaKnown RBP14.8□□□□□ -0.04
HMGN3-201ENST00000275036 FOXC1Q12948 553 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 KCNT1Q5JUK3 1230 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 PPP1R15BQ5SWA1 713 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 FAM72AQ5TYM5 149 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 MANEALQ5VSG8 457 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 FAM72DQ6L9T8 149 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 USP30Q70CQ3 517 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 SETD3Q86TU7 594 aaPredicted RBP14.8□□□□□ -0.04
HMGN3-201ENST00000275036 FAM72BQ86X60 149 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 DNAAF5Q86Y56 855 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 MCOLN2Q8IZK6 566 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 SH2D3CQ8N5H7 860 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 CCDC185Q8N715 623 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 FAM172AQ8WUF8 416 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 MUC3BQ9H195 1237 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 PCED1AQ9H1Q7 454 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 NEUROG2Q9H2A3 272 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 EBF2Q9HAK2 575 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 FBXL12Q9NXK8 326 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 VPS51Q9UID3 782 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 SLC25A13Q9UJS0 675 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 NEU3Q9UQ49 428 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 AKAP13Q12802 2813 aa14.8□□□□□ -0.04
HMGN3-201ENST00000275036 PLK4O00444 970 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 CCP110O43303 1012 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 SH3BP5O60239 455 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 RNASEH1O60930 286 aaKnown RBP14.79□□□□□ -0.04
HMGN3-201ENST00000275036 FSBPO95073 299 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 SERPINC1P01008 464 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 CCDC172P0C7W6 258 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 SRCP12931 536 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 RRM1P23921 792 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 SLC8A1P32418 973 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 NNMTP40261 264 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 PBX1P40424 430 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 CSNK1EP49674 416 aaKnown RBP14.79□□□□□ -0.04
HMGN3-201ENST00000275036 FANCCQ00597 558 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 OGDHQ02218 1023 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 ELAVL3Q14576 367 aaKnown RBP14.79□□□□□ -0.04
HMGN3-201ENST00000275036 DLG2Q15700 870 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 ACBD5Q5T8D3 534 aaPredicted RBP14.79□□□□□ -0.04
HMGN3-201ENST00000275036 DNAJC24Q6P3W2 148 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 Q6ZVU0 165 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 ZNF571Q7Z3V5 609 aaPredicted RBP14.79□□□□□ -0.04
HMGN3-201ENST00000275036 HDDC3Q8N4P3 179 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 OR7D4Q8NG98 312 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 MCEEQ96PE7 176 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 PPP1R9BQ96SB3 815 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 ZYG11BQ9C0D3 744 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 HAUS4Q9H6D7 363 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 SGK2Q9HBY8 427 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 TM9SF3Q9HD45 589 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 NDFIP2Q9NV92 336 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 AIPL1Q9NZN9 384 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 OR12D3Q9UGF7 316 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 SARDHQ9UL12 918 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 SCML1Q9UN30 329 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 HS3ST2Q9Y278 367 aa14.79□□□□□ -0.04
HMGN3-201ENST00000275036 FNDC3AQ9Y2H6 1198 aaKnown RBP14.79□□□□□ -0.04
HMGN3-201ENST00000275036 TMCO5BA8MYB1 307 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 K7ERQ8 282 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 SMAD6O43541 496 aaKnown RBP14.78□□□□□ -0.04
HMGN3-201ENST00000275036 RNASEH2AO75792 299 aaKnown RBP14.78□□□□□ -0.04
HMGN3-201ENST00000275036 TNFAIP3P21580 790 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 OR1E1P30953 314 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 DRD3P35462 400 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 PRKCIP41743 596 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 GALCP54803 685 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 NRG1Q02297 640 aaPredicted RBP14.78□□□□□ -0.04
HMGN3-201ENST00000275036 ASIC2Q16515 512 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 ZSCAN23Q3MJ62 389 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 ACCSLQ4AC99 568 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 C6orf118Q5T5N4 469 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 KIAA0895LQ68EN5 471 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 NCEH1Q6PIU2 408 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 LINGO4Q6UY18 593 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 NLRP14Q86W24 1093 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 DCAF4L2Q8NA75 395 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 GANCQ8TET4 914 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 TMEM121BQ9BXQ6 578 aaPredicted RBP14.78□□□□□ -0.04
HMGN3-201ENST00000275036 OSBPL2Q9H1P3 480 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 GAREM1Q9H706 876 aa14.78□□□□□ -0.04
HMGN3-201ENST00000275036 PPARGC1AQ9UBK2 798 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms