RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 EIF3EP60228 445 aaKnown RBP16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 RELAQ04206 551 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 KRT81Q14533 505 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 C16orf72Q14CZ0 275 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 FBXW8Q8N3Y1 598 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 LPPQ93052 612 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MCRS1Q96EZ8 462 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 AGO3Q9H9G7 860 aaKnown RBP16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CYP3A43Q9HB55 503 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ITGA11Q9UKX5 1188 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ATP5BP06576 529 aaKnown RBP16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 GRK4P32298 578 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 RXRGP48443 463 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ENTPD1P49961 510 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 FRMD7Q6ZUT3 714 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CCDC33Q8N5R6 958 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PIWIL2Q8TC59 973 aaKnown RBP16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ZFP42Q96MM3 310 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TRIM56Q9BRZ2 755 aaKnown RBP16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 DPEP3Q9H4B8 488 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SUN2Q9UH99 717 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 Q9Y3F1 56 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 AP4B1Q9Y6B7 739 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CEPT1Q9Y6K0 416 aa16.29■□□□□ 0.2
MAP1LC3B-201ENST00000268607 BIRC5O15392 142 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TRUB2O95900 331 aaKnown RBP16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 RBP3P10745 1247 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PAX3P23760 479 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CDH6P55285 790 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MAP7D1Q3KQU3 841 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ANKDD1AQ495B1 522 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 VWA5B1Q5TIE3 1220 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 BBS12Q6ZW61 710 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 POLNQ7Z5Q5 900 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 OR6B3Q8NGW1 331 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TFB1MQ8WVM0 346 aaKnown RBP16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 KATNAL1Q9BW62 490 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 VRTNQ9H8Y1 702 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 NGRNQ9NPE2 291 aaKnown RBP16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 NOD1Q9Y239 953 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 FBP2O00757 339 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ALDH2P05091 517 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 NCF2P19878 526 aaPredicted RBP16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 HOXD10P28358 340 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ACLYP53396 1101 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ITGA7Q13683 1181 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 FASTKD1Q53R41 847 aaKnown RBP16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 LHX8Q68G74 356 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TWF2Q6IBS0 349 aaKnown RBP16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CCSAPQ6IQ19 270 aaPredicted RBP16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 C16orf46Q6P387 395 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TTC30AQ86WT1 665 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ALDH16A1Q8IZ83 802 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PQLC1Q8N2U9 271 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ARRDC4Q8NCT1 418 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 UNC93B1Q9H1C4 597 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SELENONQ9NZV5 590 aa16.28■□□□□ 0.2
MAP1LC3B-201ENST00000268607 TNFAIP8O95379 198 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CSH1P0DML2 217 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 CSH2P0DML3 217 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 L1CAMP32004 1257 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 GRM5P41594 1212 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 RPL10AP62906 217 aaKnown RBP16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ZNF618Q5T7W0 954 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 LGSNQ5TDP6 509 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MAVSQ7Z434 540 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 PPP4R1Q8TF05 950 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 FNIP1Q8TF40 1166 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 FAF2Q96CS3 445 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 MAGEB5Q9BZ81 275 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 Q9H521 79 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 ZC3H7BQ9UGR2 993 aaKnown RBP16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 SSX2IPQ9Y2D8 614 aa16.27■□□□□ 0.2
MAP1LC3B-201ENST00000268607 A0A1B0GTW7 788 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SPAG6O75602 509 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 RECQL4O94761 1208 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 GABRB2P47870 512 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ATN1P54259 1190 aaPredicted RBP16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 HDAC4P56524 1084 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 YWHAZP63104 245 aaKnown RBP16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 INCA1Q0VD86 236 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 C6orf52Q5T4I8 152 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 LCLAT1Q6UWP7 414 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PACS1Q6VY07 963 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ATG14Q6ZNE5 492 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ADGRF2Q8IZF7 708 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PHTF2Q8N3S3 785 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 KLHDC9Q8NEP7 349 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SPATA18Q8TC71 538 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PNPOQ9NVS9 261 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SCN10AQ9Y5Y9 1956 aa16.27■□□□□ 0.19
MAP1LC3B-201ENST00000268607 HMX2A2RU54 273 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TFE3P19532 575 aaPredicted RBP16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 GPD1P21695 349 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 KCNA4P22459 653 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 KCNJ11Q14654 390 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PDCD4Q53EL6 469 aaKnown RBP16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 FAXCQ5TGI0 409 aa16.26■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PDPK2PQ6A1A2 396 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms