RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 GCNT7Q6ZNI0 430 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 ZNF540Q8NDQ6 660 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 PPP1R14AQ96A00 147 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 BPIFA1Q9NP55 256 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 SMPD4Q9NXE4 827 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 BTN3A3O00478 584 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 TFECO14948 347 aaPredicted RBP12.24□□□□□ -0.45
SMG6-201ENST00000263073 CRATP43155 626 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 FRG1Q14331 258 aaKnown RBP12.24□□□□□ -0.45
SMG6-201ENST00000263073 PYDC2Q56P42 97 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 PRMT9Q6P2P2 845 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 TRMT11Q7Z4G4 463 aaKnown RBP12.24□□□□□ -0.45
SMG6-201ENST00000263073 PHACTR4Q8IZ21 702 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 PHACTR1Q9C0D0 580 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 KRCC1Q9NPI7 259 aaPredicted RBP12.24□□□□□ -0.45
SMG6-201ENST00000263073 SETD4Q9NVD3 440 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 BTBD3Q9Y2F9 522 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 PCDHA11Q9Y5I1 949 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 AGLP35573 1532 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 SALL1Q9NSC2 1324 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 PNMA8CA0A1B0GUJ8 204 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 IDH3BO43837 385 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 KRT6BP04259 564 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 OR1E1P30953 314 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 RPL22P35268 128 aaKnown RBP12.24□□□□□ -0.45
SMG6-201ENST00000263073 KRT6CP48668 564 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 PSME3P61289 254 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 ABATP80404 500 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 PLCL1Q15111 1095 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 ZC3H12AQ5D1E8 599 aaKnown RBP12.24□□□□□ -0.45
SMG6-201ENST00000263073 ARMC6Q6NXE6 501 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 YTHDF3Q7Z739 585 aaKnown RBP12.24□□□□□ -0.45
SMG6-201ENST00000263073 COMMD2Q86X83 199 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 REXO2Q9Y3B8 237 aaKnown RBP12.24□□□□□ -0.45
SMG6-201ENST00000263073 NEXMIFQ5QGS0 1516 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 SMIM31A0A1B0GVY4 71 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 UBXN8O00124 270 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 NDUFB5O43674 189 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 LINC00032P0C843 101 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 CCDC166P0CW27 439 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 RARRES1P49788 294 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 STX4Q12846 297 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 FAM45AQ8TCE6 357 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 ART4Q93070 314 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 TBC1D13Q9NVG8 400 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 PRKAG3Q9UGI9 489 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 CENPXA8MT69 81 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 NRP2O60462 931 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 ADRA2BP18089 450 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 MYL12AP19105 171 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 CRABP2P29373 138 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 PGM5Q15124 567 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 OTOP1Q7RTM1 612 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 CD302Q8IX05 232 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 REXO5Q96IC2 774 aaKnown RBP12.24□□□□□ -0.45
SMG6-201ENST00000263073 FANCEQ9HB96 536 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMG6-201ENST00000263073 KLQ9UEF7 1012 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 BARX2Q9UMQ3 279 aaPredicted RBP12.24□□□□□ -0.45
SMG6-201ENST00000263073 U3KQV3 271 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 PIK3C2BO00750 1634 aa12.24□□□□□ -0.45
SMG6-201ENST00000263073 OVOS2A0A0J9YW53 1432 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 OVOS2Q6IE36 1432 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 CLTBP09497 229 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 ROR2Q01974 943 aaKnown RBP12.23□□□□□ -0.45
SMG6-201ENST00000263073 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMG6-201ENST00000263073 CTXN3Q4LDR2 81 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 TMEM132CQ8N3T6 1108 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 CAMKK1Q8N5S9 505 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 CENPIQ92674 756 aaPredicted RBP12.23□□□□□ -0.45
SMG6-201ENST00000263073 TEKT5Q96M29 485 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 SLC25A23Q9BV35 468 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 TKTL2Q9H0I9 626 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 ZMYM2Q9UBW7 1377 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 DPPA5A6NC42 116 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 TK2O00142 265 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 TIPRLO75663 272 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 ADRB2P07550 413 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 CAP2P40123 477 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 CDC42EP1Q00587 391 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 SH3RF1Q7Z6J0 888 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 OR56A4Q8NGH8 313 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 EPS8L1Q8TE68 723 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 PURBQ96QR8 312 aaKnown RBP12.23□□□□□ -0.45
SMG6-201ENST00000263073 KCNH1O95259 989 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 HIRAP54198 1017 aaPredicted RBP12.23□□□□□ -0.45
SMG6-201ENST00000263073 CYP4Z2PQ8N1L4 340 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 C19orf60Q96EN9 201 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 RIOX1Q9H6W3 641 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 CAPN8A6NHC0 703 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 TMEM114B3SHH9 223 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 USP46P62068 366 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 PTSQ03393 145 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 PDK4Q16654 411 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 FBXO47Q5MNV8 452 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 TRIM63Q969Q1 353 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 CAMKK2Q96RR4 588 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 RMI1Q9H9A7 625 aa12.23□□□□□ -0.45
SMG6-201ENST00000263073 TRNAU1APQ9NX07 287 aaKnown RBP12.23□□□□□ -0.45
SMG6-201ENST00000263073 ZNF180Q9UJW8 692 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms