RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 FBXW11Q9UKB1 542 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 FOCADQ5VW36 1801 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 FAM237BA0A1B0GVD1 139 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 ARL5CA6NH57 179 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 KDM1AO60341 852 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 KLHL2O95198 593 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 INHAP05111 366 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 IVDP26440 423 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 CDC25CP30307 473 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 PBX3P40426 434 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 ELK3P41970 407 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 GALNT2Q10471 571 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 KRT72Q14CN4 511 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 PDK4Q16654 411 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 MARK2Q7KZI7 788 aaKnown RBP8.39□□□□□ -1.07
PTPN3-201ENST00000262539 PCDH19Q8TAB3 1148 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 SLC44A1Q8WWI5 657 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 PLD4Q96BZ4 506 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 ZCWPW1Q9H0M4 648 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 SAR1AQ9NR31 198 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 SPG21Q9NZD8 308 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 PCDHGB4Q9UN71 923 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 CRTAMO95727 393 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 CRABP2P29373 138 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 ARFIP2P53365 341 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 CST9Q5W186 159 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 KIAA1958Q8N8K9 716 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 RTL3Q8N8U3 475 aaKnown RBP8.39□□□□□ -1.07
PTPN3-201ENST00000262539 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.39□□□□□ -1.07
PTPN3-201ENST00000262539 SMG8Q8ND04 991 aaKnown RBP8.39□□□□□ -1.07
PTPN3-201ENST00000262539 OR6P1Q8NGX9 317 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 BHMTQ93088 406 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 NAF1Q96HR8 494 aaKnown RBP8.39□□□□□ -1.07
PTPN3-201ENST00000262539 TEKT5Q96M29 485 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 CHMP2BQ9UQN3 213 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 TRIM17Q9Y577 477 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 RPS6KL1Q9Y6S9 549 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 PSME4Q14997 1843 aa8.39□□□□□ -1.07
PTPN3-201ENST00000262539 TRIM49D1C9J1S8 452 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 AGPSO00116 658 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 FAM153BP0C7A2 387 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 HSPA1AP0DMV8 641 aaKnown RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 HSPA1BP0DMV9 641 aaKnown RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 ADRA1DP25100 572 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 SLCO1A2P46721 670 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 FAM153CQ494X1 144 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 DNAL1Q4LDG9 190 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 KCNT1Q5JUK3 1230 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 METTL21CQ5VZV1 264 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 STK40Q8N2I9 435 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 BTBD6Q96KE9 485 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 RPRD1AQ96P16 312 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 C2orf49Q9BVC5 232 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 DNAJC17Q9NVM6 304 aaKnown RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 PPARGC1AQ9UBK2 798 aaKnown RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 PTGESO14684 152 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 BAIAP3O94812 1187 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 PAPSS2O95340 614 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 HOXB6P17509 224 aaKnown RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 RBL1P28749 1068 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 ITGA9Q13797 1035 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 LPIN1Q14693 890 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 KRT80Q6KB66 452 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 SRLQ86TD4 932 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 NUDCD3Q8IVD9 361 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 DDIASQ8IXT1 998 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 RFWD2Q8NHY2 731 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 KBTBD7Q8WVZ9 684 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 EMILIN2Q9BXX0 1053 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 FAF1Q9UNN5 650 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 R3HDM2Q9Y2K5 976 aaKnown RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 MYH8P13535 1937 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 LOXHD1Q8IVV2 1947 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 C5orf58C9J3I9 102 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 CFAP99D6REC4 459 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 AGRPO00253 132 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 RNASEH1O60930 286 aaKnown RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 HAUS5O94927 633 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 PTPN5P54829 565 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 KIAA0930Q6ICG6 404 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 CNKSR3Q6P9H4 555 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 DEFB128Q7Z7B8 93 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 HJURPQ8NCD3 748 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 ZNF669Q96BR6 464 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 OTUB2Q96DC9 234 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 HAPLN2Q9GZV7 340 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 RNF208Q9H0X6 261 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 SLC25A51Q9H1U9 297 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 ACOT9Q9Y305 439 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 STARD13Q9Y3M8 1113 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 FER1L6Q2WGJ9 1857 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 WASH4PA8MWX3 477 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 SPTLC1O15269 473 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 SYNCRIPO60506 623 aaKnown RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 AP2A1O95782 977 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 ADH1AP07327 375 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 GJB1P08034 283 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms