RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 PNMA6AP0CW24 399 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-202ENST00000262396 OR1E1P30953 314 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 AKT2P31751 481 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 NXPH1P58417 271 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 PPP2CBP62714 309 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 PPP2CAP67775 309 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 DAB2P98082 770 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 CNTN1Q12860 1018 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 OVGP1Q12889 678 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 KCNJ12Q14500 433 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 DRAP1Q14919 205 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-202ENST00000262396 PTPN20Q4JDL3 420 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 ACBD5Q5T8D3 534 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-202ENST00000262396 CXorf57Q6NSI4 855 aaKnown RBP12.56□□□□□ -0.4
TRAF4-202ENST00000262396 TFAP2DQ7Z6R9 452 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 ZNF354CQ86Y25 554 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 MARCH9Q86YJ5 346 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 RYBPQ8N488 228 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-202ENST00000262396 WDTC1Q8N5D0 677 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 SH2D3CQ8N5H7 860 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 PCMTD1Q96MG8 357 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-202ENST00000262396 EBF2Q9HAK2 575 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 PREBQ9HCU5 417 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 TOR4AQ9NXH8 423 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 CBX4O00257 560 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 TAF4O00268 1085 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 PLRG1O43660 514 aaKnown RBP12.55□□□□□ -0.4
TRAF4-202ENST00000262396 ENDOD1O94919 500 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 C1SP09871 688 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 C7P10643 843 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 EPHA8P29322 1005 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-202ENST00000262396 CHRNA3P32297 505 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 DRD3P35462 400 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 DNAJC3Q13217 504 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 SYCP1Q15431 976 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 COL28A1Q2UY09 1125 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 ARL13BQ3SXY8 428 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 RETSATQ6NUM9 610 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 LRRC69Q6ZNQ3 347 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 C14orf80Q86SX3 495 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 IQCHQ86VS3 1027 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 ZNF397Q8NF99 534 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-202ENST00000262396 GRIN3AQ8TCU5 1115 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 SAP25Q8TEE9 199 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 FRS2Q8WU20 508 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 KLK6Q92876 244 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 NXPE2Q96DL1 559 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 LRIG1Q96JA1 1093 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 ORAI3Q9BRQ5 295 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 CALN1Q9BXU9 219 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 PIGVQ9NUD9 493 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 EVA1BQ9NVM1 165 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 CHMP5Q9NZZ3 219 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 IPO11Q9UI26 975 aaKnown RBP12.55□□□□□ -0.4
TRAF4-202ENST00000262396 PPM1HQ9ULR3 514 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 PCDHGA1Q9Y5H4 931 aa12.55□□□□□ -0.4
TRAF4-202ENST00000262396 A0A1W2PQU0 124 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 A0A1W2PR77 199 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 NEMP1O14524 444 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 WNT9AO14904 365 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 SNAP91O60641 907 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 SDC3O75056 442 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 CNTN5O94779 1100 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 THEGLP0DJG4 465 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 ALPPL2P10696 532 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 SRCP12931 536 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 CYP11B1P15538 503 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 RRM1P23921 792 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 CLCN1P35523 988 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 CLCN6P51797 869 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 BNIP3Q12983 259 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-202ENST00000262396 SMAD1Q15797 465 aaKnown RBP12.54□□□□□ -0.4
TRAF4-202ENST00000262396 SLC25A52Q3SY17 297 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 FKBP15Q5T1M5 1219 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 SMYD5Q6GMV2 418 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 FBXL19Q6PCT2 694 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 LINGO4Q6UY18 593 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 SETD3Q86TU7 594 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-202ENST00000262396 TRIM69Q86WT6 500 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 TBCBQ99426 244 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 NUP62CLQ9H1M0 184 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 TNKS2Q9H2K2 1166 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 CLSTN2Q9H4D0 955 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 ERVMER34-1Q9H9K5 563 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 ATP13A1Q9HD20 1204 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 MPP6Q9NZW5 540 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 IL36AQ9UHA7 158 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 VPS51Q9UID3 782 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 SARDHQ9UL12 918 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 TBC1D30Q9Y2I9 924 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 SNX10Q9Y5X0 201 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 ZFHX4Q86UP3 3567 aa12.54□□□□□ -0.4
TRAF4-202ENST00000262396 MUC22E2RYF6 1773 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-202ENST00000262396 FAM208BQ5VWN6 2430 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 E9PAM4 449 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 RRP8O43159 456 aaKnown RBP12.53□□□□□ -0.4
TRAF4-202ENST00000262396 LATO43561 262 aa12.53□□□□□ -0.4
TRAF4-202ENST00000262396 LSM8O95777 96 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms