RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 JPH1Q9HDC5 661 aaPredicted RBP16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 PLCH1Q4KWH8 1693 aa16.21■□□□□ 0.18
PRPF40B-201ENST00000261897 B4GAT1O43505 415 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 SRP72O76094 671 aaKnown RBP16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 KRT75O95678 551 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 C2P06681 752 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 NR3C2P08235 984 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 BCAP31P51572 246 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 TPTEP56180 551 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 IKBKEQ14164 716 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 ADGRG6Q86SQ4 1221 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 PNPLA1Q8N8W4 532 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 SYTL5Q8TDW5 730 aaPredicted RBP16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 ATXN3LQ9H3M9 355 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 WDR37Q9Y2I8 494 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 GOLGA4Q13439 2230 aaKnown RBP16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 OXSR1O95747 527 aaPredicted RBP16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 CXCL8P10145 99 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 JAK1P23458 1154 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 SLC25A11Q02978 314 aaKnown RBP16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 RNF34Q969K3 372 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 MFSD3Q96ES6 412 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 NRBF2Q96F24 287 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 OSBPL11Q9BXB4 747 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 FRMD8Q9BZ67 464 aaPredicted RBP16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 MIR1-1HGQ9H1L0 117 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 ROBO1Q9Y6N7 1651 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 SLC4A1P02730 911 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 JUNP05412 331 aaKnown RBP16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 LRPAP1P30533 357 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 ARRB2P32121 409 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 GP5P40197 560 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 EMP3P54852 163 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 FBXO48Q5FWF7 155 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 KCTD8Q6ZWB6 473 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 PYROXD2Q8N2H3 581 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 OR6B3Q8NGW1 331 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 RNF146Q9NTX7 359 aa16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 GPC6Q9Y625 555 aaPredicted RBP16.2■□□□□ 0.18
PRPF40B-201ENST00000261897 SYCE1LA8MT33 242 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 E7ESA3 106 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 SNNO75324 88 aaPredicted RBP16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 MICAL2O94851 1124 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 WDTC1Q8N5D0 677 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 EMID1Q96A84 441 aaPredicted RBP16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 CPB2Q96IY4 423 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 CNPY3Q9BT09 278 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 CYTH4Q9UIA0 394 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 RNF11Q9Y3C5 154 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 PCDHA11Q9Y5I1 949 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 DENRO43583 198 aaKnown RBP16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 FBXO21O94952 628 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 DLGAP3O95886 979 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 FUCA1P04066 466 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 CES1P23141 567 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 RCVRNP35243 200 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 CD97P48960 835 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 SEPHS1P49903 392 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 BNIPLQ7Z465 357 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 ACOT1Q86TX2 421 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 RNF103O00237 685 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 CD247P20963 164 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 PIGFQ07326 219 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 POLD3Q15054 466 aaPredicted RBP16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 TGFBIQ15582 683 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 CYP51A1Q16850 503 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 BBS5Q8N3I7 341 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 PCDH19Q8TAB3 1148 aa16.19■□□□□ 0.18
PRPF40B-201ENST00000261897 NRP2O60462 931 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 PTPN11Q06124 597 aaPredicted RBP16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 MTA1Q13330 715 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 CSHL1Q14406 222 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 PGM2L1Q6PCE3 622 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 SORT1Q99523 831 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 RPF1Q9H9Y2 349 aaKnown RBP16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 DSEQ9UL01 958 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 M0R3G1 203 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 TRIM38O00635 465 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 ZNF24P17028 368 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 ZBTB8OSQ8IWT0 167 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 PQLC3Q8N755 202 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 DNAJB14Q8TBM8 379 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 URGCPQ8TCY9 931 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 GLMNQ92990 594 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 PPP1R10Q96QC0 940 aaKnown RBP16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 FANCEQ9HB96 536 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 ANKEF1Q9NU02 776 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 GPRC5DQ9NZD1 345 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 ZDHHC2Q9UIJ5 367 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 ZNF142P52746 1687 aaPredicted RBP16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 NCK1P16333 377 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 CCNA2P20248 432 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 SFNP31947 248 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 SLC15A4Q8N697 577 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 Q8N9G6 341 aaPredicted RBP16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 RP9Q8TA86 221 aaKnown RBP16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 FAM110BQ8TC76 370 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 NDRG1Q92597 394 aaKnown RBP16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 ELMO2Q96JJ3 720 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 ZNF696Q9H7X3 374 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms