RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 EPHX2P34913 555 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 PSMD7P51665 324 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 NDST2P52849 883 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 SLC6A3Q01959 620 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 MGAT5BQ3V5L5 792 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 ANKDD1AQ495B1 522 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 KCTD21Q4G0X4 260 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 PITRM1Q5JRX3 1037 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 RPS27LQ71UM5 84 aaKnown RBP16.21■□□□□ 0.19
LMNB1-201ENST00000261366 URGCPQ8TCY9 931 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 FAM149B1Q96BN6 582 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 APBA2Q99767 749 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 IARS2Q9NSE4 1012 aaKnown RBP16.21■□□□□ 0.19
LMNB1-201ENST00000261366 MRPL42Q9Y6G3 142 aaKnown RBP16.21■□□□□ 0.19
LMNB1-201ENST00000261366 HDAC3O15379 428 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 FARP2O94887 1054 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 STAMBPO95630 424 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 PDGFRBP09619 1106 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 APOFQ13790 326 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 DBN1Q16643 649 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 CERCAMQ5T4B2 595 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 STXBP5Q5T5C0 1151 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 STEAP4Q687X5 459 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 NT5C1AQ9BXI3 368 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 ACE2Q9BYF1 805 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 CXCL16Q9H2A7 254 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 BARX2Q9UMQ3 279 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 PRPF19Q9UMS4 504 aaKnown RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 ZNF510Q9Y2H8 683 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 PSME4Q14997 1843 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 KPNA7A9QM74 516 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 PPARGP37231 505 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 RPL14P50914 215 aaKnown RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 MAPK10P53779 464 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 IFRD2Q12894 506 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 GRM1Q13255 1194 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 SOWAHAQ2M3V2 549 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 HSDL1Q3SXM5 330 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 CCDC153Q494R4 210 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 MRPL45Q9BRJ2 306 aaKnown RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 TEX13BQ9BXU2 312 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 NOL11Q9H8H0 719 aaKnown RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 KLHL8Q9P2G9 620 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 DOLKQ9UPQ8 538 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 PTPRFP10586 1907 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 MATN2O00339 956 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 TPST1O60507 370 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 CCDC166P0CW27 439 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 SPRP35270 261 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 BACE1P56817 501 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 PITX1P78337 314 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 DGKDQ16760 1214 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 CLVS1Q8IUQ0 354 aaPredicted RBP16.2■□□□□ 0.18
LMNB1-201ENST00000261366 RBBP8Q99708 897 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 SLC39A3Q9BRY0 314 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 MORF4L1Q9UBU8 362 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 EBF1Q9UH73 591 aa16.2■□□□□ 0.18
LMNB1-201ENST00000261366 PPEF2O14830 753 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 ARL4AP40617 200 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 CCR3P51677 355 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 IER5Q5VY09 327 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 ZFP1Q6P2D0 407 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 TICAM1Q8IUC6 712 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 ZNF567Q8N184 647 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 TMEM102Q8N9M5 508 aaPredicted RBP16.19■□□□□ 0.18
LMNB1-201ENST00000261366 CATSPER1Q8NEC5 780 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 RP9Q8TA86 221 aaKnown RBP16.19■□□□□ 0.18
LMNB1-201ENST00000261366 DDI1Q8WTU0 396 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 KCTD4Q8WVF5 259 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 SREK1Q8WXA9 508 aaKnown RBP16.19■□□□□ 0.18
LMNB1-201ENST00000261366 TBCBQ99426 244 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 PRDM12Q9H4Q4 367 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 TIMMDC1Q9NPL8 285 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 CHRAC1Q9NRG0 131 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 RRN3Q9NYV6 651 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 CDYLQ9Y232 598 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 COPG1Q9Y678 874 aaKnown RBP16.19■□□□□ 0.18
LMNB1-201ENST00000261366 PRSS51A0A1B0GVH4 220 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 ACKR2O00590 384 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 GRID2O43424 1007 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 ZNF26P17031 533 aaPredicted RBP16.19■□□□□ 0.18
LMNB1-201ENST00000261366 FUT4P22083 530 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 PRDX6P30041 224 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 PDAP1Q13442 181 aaKnown RBP16.19■□□□□ 0.18
LMNB1-201ENST00000261366 GLRA4Q5JXX5 417 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 LCLAT1Q6UWP7 414 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 ERLEC1Q96DZ1 483 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 CPNE1Q99829 537 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 DPEP3Q9H4B8 488 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 EFCAB1Q9HAE3 211 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 GTSE1Q9NYZ3 720 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 GINS2Q9Y248 185 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 AP4S1Q9Y587 144 aa16.19■□□□□ 0.18
LMNB1-201ENST00000261366 SAC3D1A6NKF1 404 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 E7ENX8 843 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 CCDC130P13994 396 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 HNRNPLP14866 589 aaKnown RBP eCLIP16.18■□□□□ 0.18
LMNB1-201ENST00000261366 INSCQ1MX18 579 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 TREML2Q5T2D2 321 aa16.18■□□□□ 0.18
LMNB1-201ENST00000261366 PGAM4Q8N0Y7 254 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms