RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 PLCL1Q15111 1095 aa10.4□□□□□ -0.75
TRPM1-201ENST00000256552 TTC23Q5W5X9 447 aa10.4□□□□□ -0.75
TRPM1-201ENST00000256552 PLA2G4FQ68DD2 849 aa10.4□□□□□ -0.75
TRPM1-201ENST00000256552 ZNF57Q68EA5 555 aaPredicted RBP10.4□□□□□ -0.75
TRPM1-201ENST00000256552 ALDH16A1Q8IZ83 802 aa10.4□□□□□ -0.75
TRPM1-201ENST00000256552 IPMKQ8NFU5 416 aa10.4□□□□□ -0.75
TRPM1-201ENST00000256552 FAR1Q8WVX9 515 aa10.4□□□□□ -0.75
TRPM1-201ENST00000256552 SIK2Q9H0K1 926 aa10.4□□□□□ -0.75
TRPM1-201ENST00000256552 RSPH9Q9H1X1 276 aaPredicted RBP10.4□□□□□ -0.75
TRPM1-201ENST00000256552 HIPK3Q9H422 1215 aa10.4□□□□□ -0.75
TRPM1-201ENST00000256552 LIN28AQ9H9Z2 209 aaKnown RBP10.4□□□□□ -0.75
TRPM1-201ENST00000256552 TBX20Q9UMR3 447 aa10.4□□□□□ -0.75
TRPM1-201ENST00000256552 USP18Q9UMW8 372 aa10.4□□□□□ -0.75
TRPM1-201ENST00000256552 NFS1Q9Y697 457 aa10.4□□□□□ -0.75
TRPM1-201ENST00000256552 PTGIRP43119 386 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 PEX6Q13608 980 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 PABPC1LQ4VXU2 614 aaKnown RBP10.39□□□□□ -0.75
TRPM1-201ENST00000256552 FAM122CQ6P4D5 195 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 KLHL24Q6TFL4 600 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 ATL1Q8WXF7 558 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 ZNF668Q96K58 619 aaPredicted RBP10.39□□□□□ -0.75
TRPM1-201ENST00000256552 NMRAL1Q9HBL8 299 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 PNMA8BQ9ULN7 279 aaPredicted RBP10.39□□□□□ -0.75
TRPM1-201ENST00000256552 NR4A1P22736 598 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 WARSP23381 471 aaKnown RBP10.39□□□□□ -0.75
TRPM1-201ENST00000256552 TGFBR2P37173 567 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 PHKA2P46019 1235 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 CSHL1Q14406 222 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 MYLK3Q32MK0 819 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 PM20D2Q8IYS1 436 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 NIF3L1Q9GZT8 377 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 ACP6Q9NPH0 428 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 HPS4Q9NQG7 708 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 ZDHHC18Q9NUE0 388 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 GDAP2Q9NXN4 497 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 CD274Q9NZQ7 290 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 RAD17O75943 681 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 PABPC1P11940 636 aaKnown RBP10.39□□□□□ -0.75
TRPM1-201ENST00000256552 EIF2S3P41091 472 aaKnown RBP10.39□□□□□ -0.75
TRPM1-201ENST00000256552 WDR4P57081 412 aaKnown RBP10.39□□□□□ -0.75
TRPM1-201ENST00000256552 DUS1LQ6P1R4 473 aaKnown RBP10.39□□□□□ -0.75
TRPM1-201ENST00000256552 PKN3Q6P5Z2 889 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 HERC6Q8IVU3 1022 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 ZNF276Q8N554 614 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 RNF139Q8WU17 664 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 RETREG1Q9H6L5 497 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 MAP3K20Q9NYL2 800 aaKnown RBP10.39□□□□□ -0.75
TRPM1-201ENST00000256552 BAIAP2Q9UQB8 552 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 AXIN2Q9Y2T1 843 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 PCDHGA10Q9Y5H3 936 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 H6PDO95479 791 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 RARBP10826 455 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 C1QBPQ07021 282 aaKnown RBP10.39□□□□□ -0.75
TRPM1-201ENST00000256552 SPDYE7PQ495Y7 208 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 NAPEPLDQ6IQ20 393 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 HMBOX1Q6NT76 420 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 ZDHHC24Q6UX98 284 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 IFNL1Q8IU54 200 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 GRAMD2AQ8IUY3 354 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 ABRAQ8N0Z2 381 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 MCFD2Q8NI22 146 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 ITFG1Q8TB96 612 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 GAB3Q8WWW8 586 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 PPP1R10Q96QC0 940 aaKnown RBP10.39□□□□□ -0.75
TRPM1-201ENST00000256552 NEK6Q9HC98 313 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 VPS51Q9UID3 782 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 SNX8Q9Y5X2 465 aa10.39□□□□□ -0.75
TRPM1-201ENST00000256552 CEMIPQ8WUJ3 1361 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 CLRN2A0PK11 232 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 TFECO14948 347 aaPredicted RBP10.38□□□□□ -0.75
TRPM1-201ENST00000256552 NOL4O94818 638 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 EPHA3P29320 983 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 SLC26A3P40879 764 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 EPS8L1Q8TE68 723 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 PTCD3Q96EY7 689 aaKnown RBP10.38□□□□□ -0.75
TRPM1-201ENST00000256552 TBATAQ96M53 351 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 C7orf26Q96N11 449 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 POMPQ9Y244 141 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 DRG1Q9Y295 367 aaKnown RBP10.38□□□□□ -0.75
TRPM1-201ENST00000256552 SPO11Q9Y5K1 396 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 CPS1P31327 1500 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 RXRGP48443 463 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 PRKAA2P54646 552 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 ABATP80404 500 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 KLF10Q13118 480 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 PDK2Q15119 407 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 PGS1Q32NB8 556 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 SMUG1Q53HV7 270 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 GARNL3Q5VVW2 1013 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 CES3Q6UWW8 571 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 SPARTQ8N0X7 666 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 SLITRK1Q96PX8 696 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 NPAS2Q99743 824 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 RTFDC1Q9BY42 306 aaPredicted RBP10.38□□□□□ -0.75
TRPM1-201ENST00000256552 LIMD1Q9UGP4 676 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 VANGL2Q9ULK5 521 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 STXBP5LQ9Y2K9 1186 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 ALKQ9UM73 1620 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 TCRBV5S4A2TA0A5A2 114 aa10.38□□□□□ -0.75
TRPM1-201ENST00000256552 J3QRK9 145 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms