RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 KCNU1A8MYU2 1149 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 CACNG3O60359 315 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 LYPLA1O75608 230 aaPredicted RBP22.09■■□□□ 1.13
CLN6-201ENST00000249806 FAM189BP81408 668 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 ZNF33AQ06730 810 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 PPP2R5DQ14738 602 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 MBLAC2Q68D91 279 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 NAPEPLDQ6IQ20 393 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 LONP2Q86WA8 852 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 TTC9BQ8N6N2 239 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 PPP1R14CQ8TAE6 165 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 RAB3IL1Q8TBN0 382 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 NMUR2Q9GZQ4 415 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 CAB39LQ9H9S4 337 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 KCNK4Q9NYG8 393 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 ARMCX1Q9P291 453 aa22.09■■□□□ 1.13
CLN6-201ENST00000249806 E9PAM4 449 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 TADA2AO75478 443 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 FGF3P11487 239 aaPredicted RBP22.08■■□□□ 1.13
CLN6-201ENST00000249806 PTPN4P29074 926 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 SPRP35270 261 aaPredicted RBP22.08■■□□□ 1.13
CLN6-201ENST00000249806 AQP5P55064 265 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 PCLAFQ15004 111 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 DLG2Q15700 870 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 CCDC91Q7Z6B0 441 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 NUP93Q8N1F7 819 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 PLD6Q8N2A8 252 aaKnown RBP22.08■■□□□ 1.13
CLN6-201ENST00000249806 ACVR1CQ8NER5 493 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 URGCPQ8TCY9 931 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 FAM193BQ96PV7 902 aaPredicted RBP22.08■■□□□ 1.13
CLN6-201ENST00000249806 IARS2Q9NSE4 1012 aaKnown RBP22.08■■□□□ 1.13
CLN6-201ENST00000249806 THAP1Q9NVV9 213 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 SOX13Q9UN79 622 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 NYNRINQ9P2P1 1898 aaKnown RBP22.08■■□□□ 1.13
CLN6-201ENST00000249806 FCHO1O14526 889 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 TRAFD1O14545 582 aaPredicted RBP22.08■■□□□ 1.13
CLN6-201ENST00000249806 FGF10O15520 208 aaPredicted RBP22.08■■□□□ 1.13
CLN6-201ENST00000249806 PROCP04070 461 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 LIMK2P53671 638 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 VARS2Q5ST30 1063 aaKnown RBP22.08■■□□□ 1.13
CLN6-201ENST00000249806 C10orf107Q8IVU9 208 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 DCP1BQ8IZD4 617 aaKnown RBP22.08■■□□□ 1.13
CLN6-201ENST00000249806 ATAD1Q8NBU5 361 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 IPMKQ8NFU5 416 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 PTCD3Q96EY7 689 aaKnown RBP22.08■■□□□ 1.13
CLN6-201ENST00000249806 LNPEPQ9UIQ6 1025 aa22.08■■□□□ 1.13
CLN6-201ENST00000249806 VWA8A3KMH1 1905 aa22.08■■□□□ 1.12
CLN6-201ENST00000249806 MATN3O15232 486 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 SLC8A1P32418 973 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 ATG14Q6ZNE5 492 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 MON1AQ86VX9 555 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 CD99L2Q8TCZ2 262 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 IL12RB2Q99665 862 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 SCML2Q9UQR0 700 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 AAR2Q9Y312 384 aaKnown RBP22.07■■□□□ 1.12
CLN6-201ENST00000249806 HBS1LQ9Y450 684 aaKnown RBP22.07■■□□□ 1.12
CLN6-201ENST00000249806 SOAT2O75908 522 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 MLLT6P55198 1093 aaPredicted RBP22.07■■□□□ 1.12
CLN6-201ENST00000249806 PIK3R6Q5UE93 754 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 KDELC2Q7Z4H8 507 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 TNS4Q8IZW8 715 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 LZTR1Q8N653 840 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 SERPINB11Q96P15 392 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 MIPEPQ99797 713 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 GLOD4Q9HC38 313 aa22.07■■□□□ 1.12
CLN6-201ENST00000249806 TMEM189-UBE2V1I3L0A0 370 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 PAPOLAP51003 745 aaKnown RBP22.06■■□□□ 1.12
CLN6-201ENST00000249806 MPP3Q13368 585 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 FRG1Q14331 258 aaKnown RBP22.06■■□□□ 1.12
CLN6-201ENST00000249806 POU6F1Q14863 301 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 INSCQ1MX18 579 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 LINC00523Q86TU6 105 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 FAM13CQ8NE31 585 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 NSL1Q96IY1 281 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 HHIPL1Q96JK4 782 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 FCRL5Q96RD9 977 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 GMIPQ9P107 970 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 COPG2Q9UBF2 871 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 A0A1W2PQ45 241 aaPredicted RBP22.06■■□□□ 1.12
CLN6-201ENST00000249806 A0A1W2PQY0 241 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 MOXD2PA6NHM9 499 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 TBX18O95935 607 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 HLA-DQB2P05538 268 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 MAGEA12P43365 314 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 SLC1A6P48664 564 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 IRF9Q00978 393 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 SWT1Q5T5J6 900 aaKnown RBP22.06■■□□□ 1.12
CLN6-201ENST00000249806 KLHDC8BQ8IXV7 354 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 RTL3Q8N8U3 475 aaKnown RBP22.06■■□□□ 1.12
CLN6-201ENST00000249806 TBL1YQ9BQ87 522 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 EBF4Q9BQW3 602 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 KIFC1Q9BW19 673 aa22.06■■□□□ 1.12
CLN6-201ENST00000249806 RBM22Q9NW64 420 aaKnown RBP eCLIP22.06■■□□□ 1.12
CLN6-201ENST00000249806 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.06■■□□□ 1.12
CLN6-201ENST00000249806 PGGT1BP53609 377 aa22.05■■□□□ 1.12
CLN6-201ENST00000249806 ARPP19P56211 112 aa22.05■■□□□ 1.12
CLN6-201ENST00000249806 NFE2Q16621 373 aaPredicted RBP22.05■■□□□ 1.12
CLN6-201ENST00000249806 CTXN3Q4LDR2 81 aa22.05■■□□□ 1.12
CLN6-201ENST00000249806 FAM171A1Q5VUB5 890 aa22.05■■□□□ 1.12
CLN6-201ENST00000249806 DENND5AQ6IQ26 1287 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms