RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 ZNF512Q96ME7 567 aaPredicted RBP13.54□□□□□ -0.24
CCDC117-201ENST00000249064 APBA2Q99767 749 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 C6orf62Q9GZU0 229 aaPredicted RBP13.54□□□□□ -0.24
CCDC117-201ENST00000249064 NUMBLQ9Y6R0 609 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 SH3PXD2BA1X283 911 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 FUOMA2VDF0 154 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 CXorf49A8MYA2 514 aaPredicted RBP13.54□□□□□ -0.24
CCDC117-201ENST00000249064 H0Y626 953 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 VILLO15195 856 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 TCEA3O75764 348 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 SRP72O76094 671 aaKnown RBP13.54□□□□□ -0.24
CCDC117-201ENST00000249064 TRIM16O95361 564 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 PIGNO95427 931 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 PTPRAP18433 802 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 TKTP29401 623 aaKnown RBP13.54□□□□□ -0.24
CCDC117-201ENST00000249064 SERPINB9P50453 376 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 OGDHQ02218 1023 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 IMPG1Q17R60 797 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 SH3PXD2AQ5TCZ1 1133 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 IL23RQ5VWK5 629 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 C12orf29Q8N999 325 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 MED10Q9BTT4 135 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 KANSL3Q9P2N6 904 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 PNMA8BQ9ULN7 279 aaPredicted RBP13.54□□□□□ -0.24
CCDC117-201ENST00000249064 CNTNAP1P78357 1384 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 A6NL46 340 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 ANGPT2O15123 496 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 GSTA4O15217 222 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 MYO1DO94832 1006 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 TGDSO95455 350 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 ITGAXP20702 1163 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 DCAF6Q58WW2 860 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 SCUBE3Q8IX30 993 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 C12orf50Q8NA57 414 aaPredicted RBP13.54□□□□□ -0.24
CCDC117-201ENST00000249064 FLCNQ8NFG4 579 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 NCLNQ969V3 563 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 HPDLQ96IR7 371 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 BBS2Q9BXC9 721 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 EHD1Q9H4M9 534 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 FAIMQ9NVQ4 179 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 DKK3Q9UBP4 350 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 TSR3Q9UJK0 312 aaKnown RBP13.54□□□□□ -0.24
CCDC117-201ENST00000249064 RAB26Q9ULW5 256 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 COQ4Q9Y3A0 265 aa13.54□□□□□ -0.24
CCDC117-201ENST00000249064 CLUHO75153 1309 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 hCG_1818297A0A087WSY0 165 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 HEATR9A2RTY3 570 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 TMEM191CA6NGB0 347 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 NOTOA8MTQ0 251 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 APOL1O14791 398 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 LYPLA2O95372 231 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 SLC4A1P02730 911 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 TSPAN8P19075 237 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 MMP8P22894 467 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 PHKA2P46019 1235 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 HADHBP55084 474 aaKnown RBP13.53□□□□□ -0.24
CCDC117-201ENST00000249064 ABCE1P61221 599 aaKnown RBP13.53□□□□□ -0.24
CCDC117-201ENST00000249064 WASHC5Q12768 1159 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 CCDC153Q494R4 210 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 TAS1R3Q7RTX0 852 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 HERC6Q8IVU3 1022 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 CBR4Q8N4T8 237 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 SLC44A1Q8WWI5 657 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 TOR3AQ9H497 397 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 ARHGAP28Q9P2N2 729 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 STK39Q9UEW8 545 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 COL16A1Q07092 1604 aaPredicted RBP13.53□□□□□ -0.24
CCDC117-201ENST00000249064 GOLGA4Q13439 2230 aaKnown RBP13.53□□□□□ -0.24
CCDC117-201ENST00000249064 A0A087WZ62 844 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 PCNAP12004 261 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 ALOX12P18054 663 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 EFNA5P52803 228 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 XIAPP98170 497 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 CMPK2Q5EBM0 449 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 ABHD15Q6UXT9 468 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 DHRSXQ8N5I4 330 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 OMDQ99983 421 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 FDXACB1Q9BRP7 624 aaPredicted RBP13.53□□□□□ -0.24
CCDC117-201ENST00000249064 RNF38Q9H0F5 515 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 MIR1-1HGQ9H1L0 117 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 RAD21L1Q9H4I0 556 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 PCDHGB4Q9UN71 923 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 PCDHGB5Q9Y5G0 923 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 ATRNL1Q5VV63 1379 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 NFICP08651 508 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 GRK2P25098 689 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 PSMB9P28065 219 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 BAG6P46379 1132 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 GSSP48637 474 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 ADGRE1Q14246 886 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 DHFR2Q86XF0 187 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 TMEM192Q8IY95 271 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 ADCY4Q8NFM4 1077 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 RDM1Q8NG50 284 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 CPXM1Q96SM3 734 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 CAB39LQ9H9S4 337 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 ITM2CQ9NQX7 267 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 KLK14Q9P0G3 267 aa13.53□□□□□ -0.24
CCDC117-201ENST00000249064 GABBR2O75899 941 aa13.52□□□□□ -0.24
CCDC117-201ENST00000249064 TCEA1P23193 301 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms