RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 IRGCQ6NXR0 463 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 USP50Q70EL3 339 aaPredicted RBP26.06■■□□□ 1.76
RAB40C-201ENST00000248139 KCTD13Q8WZ19 329 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 COLEC11Q9BWP8 271 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 GNEQ9Y223 722 aaKnown RBP26.06■■□□□ 1.76
RAB40C-201ENST00000248139 PDCD11Q14690 1871 aaKnown RBP26.06■■□□□ 1.76
RAB40C-201ENST00000248139 CASTOR2A6NHX0 329 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 GABRDO14764 452 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 LRIG2O94898 1065 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 MPSTP25325 297 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 HARS2P49590 506 aaKnown RBP26.06■■□□□ 1.76
RAB40C-201ENST00000248139 SERPINB8P50452 374 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 PPIDQ08752 370 aaKnown RBP26.06■■□□□ 1.76
RAB40C-201ENST00000248139 MPP3Q13368 585 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 GRM3Q14832 879 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 LPCAT4Q643R3 524 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 NAIF1Q69YI7 327 aaPredicted RBP26.06■■□□□ 1.76
RAB40C-201ENST00000248139 PNPLA1Q8N8W4 532 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 C1orf21Q9H246 121 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 CASS4Q9NQ75 786 aa26.06■■□□□ 1.76
RAB40C-201ENST00000248139 MT-CYBP00156 380 aaPredicted RBP26.05■■□□□ 1.76
RAB40C-201ENST00000248139 SERPINB5P36952 375 aa26.05■■□□□ 1.76
RAB40C-201ENST00000248139 TBCCQ15814 346 aa26.05■■□□□ 1.76
RAB40C-201ENST00000248139 INSCQ1MX18 579 aa26.05■■□□□ 1.76
RAB40C-201ENST00000248139 KCTD11Q693B1 232 aa26.05■■□□□ 1.76
RAB40C-201ENST00000248139 GATA5Q9BWX5 397 aaPredicted RBP26.05■■□□□ 1.76
RAB40C-201ENST00000248139 WDCPQ9H6R7 721 aa26.05■■□□□ 1.76
RAB40C-201ENST00000248139 ITGAXP20702 1163 aa26.05■■□□□ 1.76
RAB40C-201ENST00000248139 RWDD4Q6NW29 188 aaKnown RBP26.05■■□□□ 1.76
RAB40C-201ENST00000248139 HASPINQ8TF76 798 aa26.05■■□□□ 1.76
RAB40C-201ENST00000248139 RNF34Q969K3 372 aa26.05■■□□□ 1.76
RAB40C-201ENST00000248139 VPS39Q96JC1 886 aa26.05■■□□□ 1.76
RAB40C-201ENST00000248139 PPP1R10Q96QC0 940 aaKnown RBP26.05■■□□□ 1.76
RAB40C-201ENST00000248139 NMRAL1Q9HBL8 299 aa26.05■■□□□ 1.76
RAB40C-201ENST00000248139 DNAJC28Q9NX36 388 aa26.05■■□□□ 1.76
RAB40C-201ENST00000248139 CTSHP09668 335 aa26.04■■□□□ 1.76
RAB40C-201ENST00000248139 MSX2P35548 267 aaPredicted RBP26.04■■□□□ 1.76
RAB40C-201ENST00000248139 CCNIQ14094 377 aa26.04■■□□□ 1.76
RAB40C-201ENST00000248139 CNTD1Q8N815 330 aa26.04■■□□□ 1.76
RAB40C-201ENST00000248139 AXLP30530 894 aa26.04■■□□□ 1.76
RAB40C-201ENST00000248139 PPM1LQ5SGD2 360 aa26.04■■□□□ 1.76
RAB40C-201ENST00000248139 TDRD5Q8NAT2 981 aaKnown RBP26.04■■□□□ 1.76
RAB40C-201ENST00000248139 ZNF419Q96HQ0 510 aaPredicted RBP26.04■■□□□ 1.76
RAB40C-201ENST00000248139 GBA3Q9H227 469 aa26.04■■□□□ 1.76
RAB40C-201ENST00000248139 TASP1Q9H6P5 420 aa26.04■■□□□ 1.76
RAB40C-201ENST00000248139 CDH22Q9UJ99 828 aa26.04■■□□□ 1.76
RAB40C-201ENST00000248139 PCDHB12Q9Y5F1 795 aa26.04■■□□□ 1.76
RAB40C-201ENST00000248139 EPHA3P29320 983 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 NAB1Q13506 487 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 OR6Y1Q8NGX8 325 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 CDH19Q9H159 772 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 TSC2P49815 1807 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 DFFAO00273 331 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 CDC42EP1Q00587 391 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 CDC16Q13042 620 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 POU6F1Q14863 301 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 CCDC153Q494R4 210 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 MARK4Q96L34 752 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 ATXN3LQ9H3M9 355 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 S100A14Q9HCY8 104 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 NUDT5Q9UKK9 219 aa26.03■■□□□ 1.76
RAB40C-201ENST00000248139 MAGEA12P43365 314 aa26.02■■□□□ 1.76
RAB40C-201ENST00000248139 CTBP1Q13363 440 aa26.02■■□□□ 1.76
RAB40C-201ENST00000248139 FAM219BQ5XKK7 198 aa26.02■■□□□ 1.76
RAB40C-201ENST00000248139 OR52E8Q6IFG1 317 aa26.02■■□□□ 1.76
RAB40C-201ENST00000248139 DENND6AQ8IWF6 608 aa26.02■■□□□ 1.76
RAB40C-201ENST00000248139 LENG8Q96PV6 779 aaPredicted RBP26.02■■□□□ 1.76
RAB40C-201ENST00000248139 ADAMTS6Q9UKP5 1117 aa26.02■■□□□ 1.76
RAB40C-201ENST00000248139 SF3B1O75533 1304 aaKnown RBP eCLIP26.02■■□□□ 1.761e-6■■■■■ 94.1
RAB40C-201ENST00000248139 BHLHA9Q7RTU4 235 aa26.02■■□□□ 1.76
RAB40C-201ENST00000248139 ECSITQ9BQ95 431 aa26.02■■□□□ 1.76
RAB40C-201ENST00000248139 FTHL17Q9BXU8 183 aa26.02■■□□□ 1.76
RAB40C-201ENST00000248139 SORCS3Q9UPU3 1222 aa26.02■■□□□ 1.76
RAB40C-201ENST00000248139 TTC3P53804 2025 aa26.02■■□□□ 1.76
RAB40C-201ENST00000248139 JUNP05412 331 aaKnown RBP26.01■■□□□ 1.76
RAB40C-201ENST00000248139 GABRB3P28472 473 aa26.01■■□□□ 1.76
RAB40C-201ENST00000248139 ASPHQ12797 758 aa26.01■■□□□ 1.76
RAB40C-201ENST00000248139 DBN1Q16643 649 aa26.01■■□□□ 1.76
RAB40C-201ENST00000248139 TMEM198Q66K66 360 aa26.01■■□□□ 1.76
RAB40C-201ENST00000248139 EPGNQ6UW88 154 aa26.01■■□□□ 1.76
RAB40C-201ENST00000248139 EP400NLQ6ZTU2 488 aa26.01■■□□□ 1.76
RAB40C-201ENST00000248139 KCTD4Q8WVF5 259 aa26.01■■□□□ 1.76
RAB40C-201ENST00000248139 AIM2O14862 343 aa26.01■■□□□ 1.75
RAB40C-201ENST00000248139 BUD23O43709 281 aaKnown RBP26.01■■□□□ 1.75
RAB40C-201ENST00000248139 COX4I1P13073 169 aa26.01■■□□□ 1.75
RAB40C-201ENST00000248139 BDNFP23560 247 aa26.01■■□□□ 1.75
RAB40C-201ENST00000248139 LRPAP1P30533 357 aa26.01■■□□□ 1.75
RAB40C-201ENST00000248139 CRYBB1P53674 252 aaPredicted RBP26.01■■□□□ 1.75
RAB40C-201ENST00000248139 PDZD4Q76G19 769 aaPredicted RBP26.01■■□□□ 1.75
RAB40C-201ENST00000248139 CLEC14AQ86T13 490 aa26.01■■□□□ 1.75
RAB40C-201ENST00000248139 TAC4Q86UU9 113 aa26.01■■□□□ 1.75
RAB40C-201ENST00000248139 ZC3H15Q8WU90 426 aaKnown RBP26.01■■□□□ 1.75
RAB40C-201ENST00000248139 GTF3C2Q8WUA4 911 aaPredicted RBP26.01■■□□□ 1.75
RAB40C-201ENST00000248139 SCYL1Q96KG9 808 aa26.01■■□□□ 1.75
RAB40C-201ENST00000248139 OMDQ99983 421 aa26.01■■□□□ 1.75
RAB40C-201ENST00000248139 SIKE1Q9BRV8 207 aa26.01■■□□□ 1.75
RAB40C-201ENST00000248139 EBF3Q9H4W6 596 aa26.01■■□□□ 1.75
RAB40C-201ENST00000248139 SCOCQ9UIL1 159 aa26.01■■□□□ 1.75
RAB40C-201ENST00000248139 TRIM13O60858 407 aa26.01■■□□□ 1.75
RAB40C-201ENST00000248139 SBK3P0C264 359 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms