RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 HEMGNQ9BXL5 484 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 NFKBIZQ9BYH8 718 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 FAM126AQ9BYI3 521 aaPredicted RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 SPATC1LQ9H0A9 340 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 RXFP1Q9HBX9 757 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 PCDH9Q9HC56 1237 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 CISHQ9NSE2 258 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 GGA3Q9NZ52 723 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 GPRC5DQ9NZD1 345 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 USP36Q9P275 1121 aaKnown RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 FETUBQ9UGM5 382 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 CFAP73A6NFT4 308 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 DNM1LO00429 736 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 ACKR2O00590 384 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 SUN1O94901 812 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 TNNC2P02585 160 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 KRT7P08729 469 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 HOXC6P09630 235 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 BRAFP15056 766 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 TSHRP16473 764 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 CD58P19256 250 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 TCF7P36402 384 aaPredicted RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 SSR1P43307 286 aaKnown RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 MYL6P60660 151 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 RPL7AP62424 266 aaKnown RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 ITKQ08881 620 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 LAMTOR4Q0VGL1 99 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 OASLQ15646 514 aaKnown RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 TAZQ16635 292 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 CPZQ66K79 652 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 MFSD7Q6UXD7 560 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 GSTA5Q7RTV2 222 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 TRPM8Q7Z2W7 1104 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 ZNF605Q86T29 641 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 ERICH1Q86X53 443 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 ZNF610Q8N9Z0 462 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 ANKRD36BP1Q96IX9 119 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 MAGEB18Q96M61 343 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 RBM15Q96T37 977 aaKnown RBP eCLIP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 TCHPQ9BT92 498 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 MTMR12Q9C0I1 747 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 FZD8Q9H461 694 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 PTPRHQ9HD43 1115 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 SLC40A1Q9NP59 571 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 KLC4Q9NSK0 619 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 NKIRAS1Q9NYS0 192 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 SLC12A4Q9UP95 1085 aa8.18□□□□□ -1.1
CXCR4-201ENST00000241393 USP15Q9Y4E8 981 aaPredicted RBP8.18□□□□□ -1.1
CXCR4-201ENST00000241393 LRRC37A2A6NM11 1700 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 SIGLEC16A6NMB1 481 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 CHUKO15111 745 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 ALOX15BO15296 676 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 TNFSF9P41273 254 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 CDKN2BP42772 138 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 FSTL1Q12841 308 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 LLGL1Q15334 1064 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 TRIP13Q15645 432 aaPredicted RBP8.17□□□□□ -1.1
CXCR4-201ENST00000241393 KYAT1Q16773 422 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 HADHQ16836 314 aaKnown RBP8.17□□□□□ -1.1
CXCR4-201ENST00000241393 ZNF699Q32M78 642 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 P3H1Q32P28 736 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 PLEKHG6Q3KR16 790 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 C2CD6Q53TS8 623 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 CELF3Q5SZQ8 465 aaKnown RBP8.17□□□□□ -1.1
CXCR4-201ENST00000241393 TIGD7Q6NT04 549 aaPredicted RBP8.17□□□□□ -1.1
CXCR4-201ENST00000241393 RGS9BPQ6ZS82 235 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 FRMD7Q6ZUT3 714 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 PHLDB2Q86SQ0 1253 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 RASSF3Q86WH2 238 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 THNSL1Q8IYQ7 743 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 FUKQ8N0W3 1084 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 GPC2Q8N158 579 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 TTC39CQ8N584 583 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 RNF149Q8NC42 400 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 ARRDC4Q8NCT1 418 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 WDR48Q8TAF3 677 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 SLC35B2Q8TB61 432 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 MAML1Q92585 1016 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 MCEEQ96PE7 176 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 ELF4Q99607 663 aaPredicted RBP8.17□□□□□ -1.1
CXCR4-201ENST00000241393 GPR20Q99678 358 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 ELAC2Q9BQ52 826 aaKnown RBP8.17□□□□□ -1.1
CXCR4-201ENST00000241393 XYLT2Q9H1B5 865 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 IRF2BPLQ9H1B7 796 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 CYP3A43Q9HB55 503 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 BTBD7Q9P203 1132 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 SLC24A2Q9UI40 661 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 DNPEPQ9ULA0 475 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 SMG5Q9UPR3 1016 aaKnown RBP8.17□□□□□ -1.1
CXCR4-201ENST00000241393 NAALADL1Q9UQQ1 740 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 ZNF148Q9UQR1 794 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 TNFSF13BQ9Y275 285 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 ASB1Q9Y576 335 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 PTPRFP10586 1907 aa8.17□□□□□ -1.1
CXCR4-201ENST00000241393 FAM47DPA6NHR8 397 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 CXCL11O14625 94 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 PRPF4O43172 522 aaKnown RBP eCLIP8.16□□□□□ -1.1
CXCR4-201ENST00000241393 HBP1O60381 514 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 PAPLNO95428 1278 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 HARSP12081 509 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms