RNA–Protein interactions for RNA: ENST00000239906.9

FAM53C-201, Transcript of family with sequence similarity 53 member C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53C, Length 4,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53C-201ENST00000239906 TMEM59LQ9UK28 342 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 MYH7P12883 1935 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 TJP1Q07157 1748 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 MYO1GB0I1T2 1018 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 H3BMM5 538 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 TPP1O14773 563 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 TSPAN1O60635 241 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 TCEA3O75764 348 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 NFKB1P19838 968 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 ATP5C1P36542 298 aaKnown RBP11.28□□□□□ -0.6
FAM53C-201ENST00000239906 MAPK8P45983 427 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 GABRB2P47870 512 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 ZNF284Q2VY69 593 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 MON1AQ86VX9 555 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 POU5F2Q8N7G0 328 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 DLG3Q92796 817 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 FAM162AQ96A26 154 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 CSPG4P5Q96PW8 444 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 CCT7Q99832 543 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 MRPL45Q9BRJ2 306 aaKnown RBP11.28□□□□□ -0.6
FAM53C-201ENST00000239906 SPATA16Q9BXB7 569 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 ZYG11BQ9C0D3 744 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 CROTQ9UKG9 612 aa11.28□□□□□ -0.6
FAM53C-201ENST00000239906 OR6C75A6NL08 312 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 C5orf58C9J3I9 102 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 ADCY6O43306 1168 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 TRIM16O95361 564 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 ITGA2BP08514 1039 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 ERVK-10P10266 1014 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 CES1P23141 567 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 ATP6V1E1P36543 226 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 PIK3CGP48736 1102 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 PLOD1Q02809 727 aaPredicted RBP11.27□□□□□ -0.6
FAM53C-201ENST00000239906 RNASEH2BQ5TBB1 312 aaKnown RBP11.27□□□□□ -0.6
FAM53C-201ENST00000239906 ANKS1BQ7Z6G8 1248 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 CARNMT1Q8N4J0 409 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 P2RY11Q96G91 374 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 C17orf80Q9BSJ5 609 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 NEUROG2Q9H2A3 272 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 CAAP1Q9H8G2 361 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 CDHR5Q9HBB8 845 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 GRHL1Q9NZI5 618 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 AP3M1Q9Y2T2 418 aa11.27□□□□□ -0.6
FAM53C-201ENST00000239906 ZNF536O15090 1300 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 SF3B1O75533 1304 aaKnown RBP eCLIP11.27□□□□□ -0.612e-8■■■■■ 40.2
FAM53C-201ENST00000239906 ZNF541Q9H0D2 1346 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 hCG_2014768A0A024R1R8 64 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 TCRBV7S2A1N4TA0A589 114 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 FZD9O00144 591 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 TRAFD1O14545 582 aaPredicted RBP11.27□□□□□ -0.61
FAM53C-201ENST00000239906 TSPAN3O60637 253 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 PIGNO95427 931 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 PPP3CCP48454 512 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 ATN1P54259 1190 aaPredicted RBP11.27□□□□□ -0.61
FAM53C-201ENST00000239906 NFYCQ13952 458 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 LACTB2Q53H82 288 aaPredicted RBP11.27□□□□□ -0.61
FAM53C-201ENST00000239906 NOMO2Q5JPE7 1267 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 CPT1BQ92523 772 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 MYLPFQ96A32 169 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 NXF3Q9H4D5 531 aaKnown RBP11.27□□□□□ -0.61
FAM53C-201ENST00000239906 SCHIP1Q9P0W5 487 aaPredicted RBP11.27□□□□□ -0.61
FAM53C-201ENST00000239906 IPPQ9Y573 584 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 C5orf60A6NFR6 353 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 TBKBP1A7MCY6 615 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 SPTLC1O15269 473 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 RAD51BO15315 384 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 ZCCHC18P0CG32 403 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 ABCG1P45844 678 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 SAMD4BQ5PRF9 694 aaKnown RBP11.27□□□□□ -0.61
FAM53C-201ENST00000239906 C16orf46Q6P387 395 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 PACS2Q86VP3 889 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 LGI2Q8N0V4 545 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 OR56A4Q8NGH8 313 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 USP6NLQ92738 828 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 HNRNPABQ99729 332 aaKnown RBP11.27□□□□□ -0.61
FAM53C-201ENST00000239906 NMRK2Q9NPI5 230 aa11.27□□□□□ -0.61
FAM53C-201ENST00000239906 TNPO3Q9Y5L0 923 aaKnown RBP11.27□□□□□ -0.61
FAM53C-201ENST00000239906 COL2A1P02458 1487 aaPredicted RBP11.27□□□□□ -0.61
FAM53C-201ENST00000239906 LGR5O75473 907 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 LTA4HP09960 611 aaKnown RBP11.26□□□□□ -0.61
FAM53C-201ENST00000239906 POLD2P49005 469 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 ZBTB17Q13105 803 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 FUT11Q495W5 492 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 SPDYE7PQ495Y7 208 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 GALNTL6Q49A17 601 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 VSTM1Q6UX27 236 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
FAM53C-201ENST00000239906 NKAPQ8N5F7 415 aaKnown RBP11.26□□□□□ -0.61
FAM53C-201ENST00000239906 PPP1R10Q96QC0 940 aaKnown RBP11.26□□□□□ -0.61
FAM53C-201ENST00000239906 SH3GL3Q99963 347 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 RRAGCQ9HB90 399 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 MYH15Q9Y2K3 1946 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 C2CD4BA6NLJ0 364 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 HDAC3O15379 428 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 CRADDP78560 199 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 DAB2P98082 770 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 PRAMEF19Q5SWL8 479 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 ADGRD1Q6QNK2 874 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 LPCAT1Q8NF37 534 aa11.26□□□□□ -0.61
FAM53C-201ENST00000239906 PTCD2Q8WV60 388 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms