RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 KRT7P08729 469 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 GGCXP38435 758 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 ARL4AP40617 200 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 SLC1A1P43005 524 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 GEMIN4P57678 1058 aaKnown RBP11.57□□□□□ -0.56
SF3B6-201ENST00000233468 TPI1P60174 286 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 SLC20A2Q08357 652 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 SFSWAPQ12872 951 aaKnown RBP11.57□□□□□ -0.56
SF3B6-201ENST00000233468 ZNF234Q14588 700 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 TCEAL1Q15170 157 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 FUT11Q495W5 492 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 USP39Q53GS9 565 aaKnown RBP11.57□□□□□ -0.56
SF3B6-201ENST00000233468 ALFQ53S48 1182 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 FSCBQ5H9T9 825 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 PPM1JQ5JR12 505 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 MANEALQ5VSG8 457 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 CXorf57Q6NSI4 855 aaKnown RBP11.57□□□□□ -0.56
SF3B6-201ENST00000233468 RETSATQ6NUM9 610 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 THSD4Q6ZMP0 1018 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 PRR23CQ6ZRP0 262 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 TFAP2DQ7Z6R9 452 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 WDR5BQ86VZ2 330 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 CIR1Q86X95 450 aaPredicted RBP11.57□□□□□ -0.56
SF3B6-201ENST00000233468 MAP7D3Q8IWC1 876 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 SFTPA1Q8IWL2 248 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 CCDC112Q8NEF3 446 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 SLC35G2Q8TBE7 412 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 WFDC5Q8TCV5 224 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 TEKT4Q8WW24 435 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 LMLNQ96KR4 655 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 PACSIN1Q9BY11 444 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 DHX35Q9H5Z1 703 aaKnown RBP11.57□□□□□ -0.56
SF3B6-201ENST00000233468 NPDC1Q9NQX5 325 aaPredicted RBP11.57□□□□□ -0.56
SF3B6-201ENST00000233468 TMPRSS4Q9NRS4 437 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 TMEM248Q9NWD8 314 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 CACNA2D2Q9NY47 1150 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 MPP6Q9NZW5 540 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 HPCAL4Q9UM19 191 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 SNX10Q9Y5X0 201 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 ABCA7Q8IZY2 2146 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 A0A0A6YYK5 440 aaPredicted RBP11.56□□□□□ -0.56
SF3B6-201ENST00000233468 TCRBV21S2A2A0A5A6 115 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 H3BRJ5 948 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 SMAPO00193 183 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 SLC30A4O14863 429 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 AXIN1O15169 862 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 RAMP2O60895 175 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 RNASEH1O60930 286 aaKnown RBP11.56□□□□□ -0.56
SF3B6-201ENST00000233468 ADAM23O75077 832 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 ZNF217O75362 1048 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 MTA2O94776 668 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 CNTN5O94779 1100 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 EPHX1P07099 455 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 ADRB1P08588 477 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 IL12RB1P42701 662 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 NOP2P46087 812 aaKnown RBP11.56□□□□□ -0.56
SF3B6-201ENST00000233468 HCAR3P49019 387 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 ZNF252P-AS1Q0IIN9 211 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 ENPP2Q13822 863 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 SF3A2Q15428 464 aaKnown RBP11.56□□□□□ -0.56
SF3B6-201ENST00000233468 CSRP2Q16527 193 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 IFI16Q16666 785 aaKnown RBP11.56□□□□□ -0.56
SF3B6-201ENST00000233468 RAB6CQ53S08 254 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 ODF2Q5BJF6 829 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 TMEM215Q68D42 235 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 IL31Q6EBC2 164 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 METTL3Q86U44 580 aaKnown RBP11.56□□□□□ -0.56
SF3B6-201ENST00000233468 PGBD3Q8N328 593 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 LZTR1Q8N653 840 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 RTL3Q8N8U3 475 aaKnown RBP11.56□□□□□ -0.56
SF3B6-201ENST00000233468 DCAF4L2Q8NA75 395 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 CYB5D2Q8WUJ1 264 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 NUP205Q92621 2012 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 SPACA7Q96KW9 195 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 CCDC114Q96M63 670 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 HHIPQ96QV1 700 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 SNRNP25Q9BV90 132 aaKnown RBP11.56□□□□□ -0.56
SF3B6-201ENST00000233468 TRIM7Q9C029 511 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 RAB6CQ9H0N0 254 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 MAGEH1Q9H213 219 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 SMOC1Q9H4F8 434 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 ERVW-1Q9UQF0 538 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 MYOFQ9NZM1 2061 aa11.56□□□□□ -0.56
SF3B6-201ENST00000233468 TARSL2A2RTX5 802 aaKnown RBP11.55□□□□□ -0.56
SF3B6-201ENST00000233468 ZSCAN5CA6NGD5 496 aaPredicted RBP11.55□□□□□ -0.56
SF3B6-201ENST00000233468 SOWAHDA6NJG2 315 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 WASH4PA8MWX3 477 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 FAM72CH0Y354 149 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 MZF1P28698 734 aaPredicted RBP11.55□□□□□ -0.56
SF3B6-201ENST00000233468 WASP42768 502 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 YBEYP58557 167 aaPredicted RBP11.55□□□□□ -0.56
SF3B6-201ENST00000233468 GNA12Q03113 381 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 KRT81Q14533 505 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 MESDQ14696 234 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 POLD3Q15054 466 aaPredicted RBP11.55□□□□□ -0.56
SF3B6-201ENST00000233468 DPYSL2Q16555 572 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 PARP15Q460N3 678 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 PPP6R3Q5H9R7 873 aaPredicted RBP11.55□□□□□ -0.56
SF3B6-201ENST00000233468 ZFYVE27Q5T4F4 411 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 FAM72AQ5TYM5 149 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms