RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 POLR1EQ9GZS1 481 aaKnown RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 CLEC4MQ9H2X3 399 aaPredicted RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 DNAJC18Q9H819 358 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 ETNK2Q9NVF9 386 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 TRPV2Q9Y5S1 764 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 MEGF6O75095 1541 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 PTGES3LE9PB15 166 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 POLR2EP19388 210 aaKnown RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 POLR2LP62875 67 aaKnown RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 CLVS1Q8IUQ0 354 aaPredicted RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 TBCDQ9BTW9 1192 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 SLC25A23Q9BV35 468 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 FAM126AQ9BYI3 521 aaPredicted RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 ZDHHC6Q9H6R6 413 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 ARL15Q9NXU5 204 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 NFASCO94856 1347 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 SLIT1O75093 1534 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 APOC4-APOC2K7ER74 178 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 KPNA4O00629 521 aaPredicted RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 OR6A2O95222 327 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 APOC2P02655 101 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 EIF4BP23588 611 aaKnown RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 PSEN2P49810 448 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 MAPK11Q15759 364 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 NPNTQ6UXI9 565 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 FLCNQ8NFG4 579 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 ENKURQ8TC29 256 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 CEP44Q9C0F1 390 aa11.73□□□□□ -0.53
LAMA4-201ENST00000230538 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.73□□□□□ -0.53
LAMA4-201ENST00000230538 ANKRD63C9JTQ0 380 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ZW10O43264 779 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ALOX12P18054 663 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 FGFR3P22607 806 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 DGKAP23743 735 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ADORA2AP29274 412 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ITGA1P56199 1179 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 DLG4P78352 724 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 MSLNQ13421 630 aaPredicted RBP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 PARP6Q2NL67 630 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ISLR2Q6UXK2 745 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ZDHHC13Q8IUH4 622 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 STK40Q8N2I9 435 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 MAGEC3Q8TD91 643 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 SEMA4BQ9NPR2 832 aaPredicted RBP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ABCC13Q9NSE7 274 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 RAB21Q9UL25 225 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 TMEM191CA6NGB0 347 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ZSCAN5DPP0CG00 497 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 LRPAP1P30533 357 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 TGFB2P61812 414 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 XRCC4Q13426 336 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 PAGE2BQ5JRK9 111 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 FAM83AQ86UY5 434 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 KATNAL2Q8IYT4 538 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 DHRSXQ8N5I4 330 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ERLEC1Q96DZ1 483 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ZBTB45Q96K62 511 aaPredicted RBP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 DCUN1D5Q9BTE7 237 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 TLR10Q9BXR5 811 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 EPB41L4BQ9H329 900 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 LRRIQ1Q96JM4 1722 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 SF3B1O75533 1304 aaKnown RBP eCLIP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 C15orf38-AP3S2A0A0A6YYH1 394 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 XYLBO75191 536 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 KLHL18O94889 574 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ITGAXP20702 1163 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 MAPK10P53779 464 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 OAZ1P54368 228 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ARPINQ7Z6K5 226 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 MARK4Q96L34 752 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 PAIP1Q9H074 479 aaKnown RBP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 CHST7Q9NS84 486 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 TMEM39AQ9NV64 488 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ZNF624Q9P2J8 865 aaPredicted RBP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 PCDHA11Q9Y5I1 949 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 N6AMT1Q9Y5N5 214 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 UMODL1Q5DID0 1318 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 BCLAF3A2AJT9 711 aaKnown RBP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 SHBGP04278 402 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 RPL14P50914 215 aaKnown RBP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 IL2P60568 153 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 SLC41A1Q8IVJ1 513 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ZNF276Q8N554 614 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 CSGALNACT1Q8TDX6 532 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 SPACA7Q96KW9 195 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 C1QTNF7Q9BXJ2 289 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 PDGFDQ9GZP0 370 aaPredicted RBP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 NRDE2Q9H7Z3 1164 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 RPRD1BQ9NQG5 326 aaKnown RBP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 DIP2CQ9Y2E4 1556 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 A0A088AWK7 358 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 KPNA3O00505 521 aaPredicted RBP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 USP12O75317 370 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 AKR1A1P14550 325 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ZNF10P21506 573 aaPredicted RBP11.72□□□□□ -0.53
LAMA4-201ENST00000230538 KDELR1P24390 212 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 SPIDRQ14159 915 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 ZSWIM7Q19AV6 140 aa11.72□□□□□ -0.53
LAMA4-201ENST00000230538 CACUL1Q86Y37 369 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms