RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 GRTP1Q5TC63 336 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 C15orf39Q6ZRI6 1047 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 TMEM40Q8WWA1 233 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 FCRL2Q96LA5 508 aaPredicted RBP17.03■□□□□ 0.32
PTK7-202ENST00000230419 ZBTB18Q99592 522 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 ACE2Q9BYF1 805 aaPredicted RBP17.03■□□□□ 0.32
PTK7-202ENST00000230419 BATF3Q9NR55 127 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 APPL1Q9UKG1 709 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 PLLPQ9Y342 182 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 PFDN1O60925 122 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 BEST1O76090 585 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 ATG7O95352 703 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 C2P06681 752 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 THRAP10827 490 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 ALDH7A1P49419 539 aaKnown RBP17.03■□□□□ 0.32
PTK7-202ENST00000230419 SLC25A11Q02978 314 aaKnown RBP17.03■□□□□ 0.32
PTK7-202ENST00000230419 ZNF567Q8N184 647 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 NAT8LQ8N9F0 302 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 LPCAT1Q8NF37 534 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 MCRS1Q96EZ8 462 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 TBL1YQ9BQ87 522 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 DENND2DQ9H6A0 471 aaPredicted RBP17.03■□□□□ 0.32
PTK7-202ENST00000230419 ALG9Q9H6U8 611 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 STARD7Q9NQZ5 370 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 DSEQ9UL01 958 aa17.03■□□□□ 0.32
PTK7-202ENST00000230419 CLUHO75153 1309 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 PEX1O43933 1283 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 PRKAR2AP13861 404 aaKnown RBP17.02■□□□□ 0.32
PTK7-202ENST00000230419 FGFR3P22607 806 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 SPANXN3Q5MJ09 141 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 CARNMT1Q8N4J0 409 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 CYGBQ8WWM9 190 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 EFCAB1Q9HAE3 211 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 XPR1Q9UBH6 696 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 AP3B1O00203 1094 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 NCAM2O15394 837 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 PSMG1O95456 288 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 AKT1P31749 480 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 ABCE1P61221 599 aaKnown RBP17.02■□□□□ 0.32
PTK7-202ENST00000230419 MRPS6P82932 125 aaKnown RBP17.02■□□□□ 0.32
PTK7-202ENST00000230419 PLOD1Q02809 727 aaPredicted RBP17.02■□□□□ 0.32
PTK7-202ENST00000230419 SOX4Q06945 474 aaPredicted RBP17.02■□□□□ 0.32
PTK7-202ENST00000230419 DDX39BQ13838 428 aaKnown RBP17.02■□□□□ 0.32
PTK7-202ENST00000230419 RFWD3Q6PCD5 774 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 CMASQ8NFW8 434 aaPredicted RBP17.02■□□□□ 0.32
PTK7-202ENST00000230419 COLEC11Q9BWP8 271 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 KCNK4Q9NYG8 393 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 LGALS13Q9UHV8 139 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 RNF112Q9ULX5 631 aa17.02■□□□□ 0.32
PTK7-202ENST00000230419 XIRP1Q702N8 1843 aaKnown RBP17.02■□□□□ 0.32
PTK7-202ENST00000230419 NRP1O14786 923 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 SPATA31D3P0C874 917 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 RAG1P15918 1043 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 CHRNA4P43681 627 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 MRPS35P82673 323 aaKnown RBP17.02■□□□□ 0.31
PTK7-202ENST00000230419 SPRYD7Q5W111 196 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 MRNIPQ6NTE8 343 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 KYAT3Q6YP21 454 aaKnown RBP17.02■□□□□ 0.31
PTK7-202ENST00000230419 RIPOR1Q6ZS17 1223 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 SPATA31D4Q6ZUB0 917 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 OR52K2Q8NGK3 314 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 GCNAQ96QF7 691 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 EBF4Q9BQW3 602 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 UBE2OQ9C0C9 1292 aaKnown RBP17.02■□□□□ 0.31
PTK7-202ENST00000230419 SEMA6AQ9H2E6 1030 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 POMKQ9H5K3 350 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 MOSPD1Q9UJG1 213 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 AK5Q9Y6K8 562 aa17.02■□□□□ 0.31
PTK7-202ENST00000230419 GUCA1CO95843 209 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 CKMP06732 381 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 CCDC166P0CW27 439 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 GRIA4P48058 902 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 NOMO2Q5JPE7 1267 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 SLC26A9Q7LBE3 791 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 LGI2Q8N0V4 545 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 ADAM7Q9H2U9 754 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 GPBP1L1Q9HC44 474 aaPredicted RBP17.01■□□□□ 0.31
PTK7-202ENST00000230419 RGS18Q9NS28 235 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 NSMCE4AQ9NXX6 385 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.01■□□□□ 0.31
PTK7-202ENST00000230419 HACD1B0YJ81 288 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 KATNA1O75449 491 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 LRIG2O94898 1065 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 TRIM16O95361 564 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 ZNF177Q13360 481 aaPredicted RBP17.01■□□□□ 0.31
PTK7-202ENST00000230419 CDH18Q13634 790 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 RBM15BQ8NDT2 890 aaKnown RBP17.01■□□□□ 0.31
PTK7-202ENST00000230419 SH3TC2Q8TF17 1288 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 CNDP1Q96KN2 507 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 SAR1AQ9NR31 198 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 PIGVQ9NUD9 493 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 PRPF4O43172 522 aaKnown RBP eCLIP17.01■□□□□ 0.31
PTK7-202ENST00000230419 ASGR1P07306 291 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 BPGMP07738 259 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 IVDP26440 423 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 AXLP30530 894 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 GJA5P36382 358 aa17.01■□□□□ 0.31
PTK7-202ENST00000230419 KLF1Q13351 362 aaPredicted RBP17.01■□□□□ 0.31
PTK7-202ENST00000230419 POLD3Q15054 466 aaPredicted RBP17.01■□□□□ 0.31
PTK7-202ENST00000230419 TRMT5Q32P41 509 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms