RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 ABCG1P45844 678 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 THOP1P52888 689 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 ADGRE1Q14246 886 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 RARS2Q5T160 578 aaKnown RBP17.81■□□□□ 0.44
PRPF19-201ENST00000227524 ARMC3Q5W041 872 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 BNC2Q6ZN30 1099 aaPredicted RBP17.81■□□□□ 0.44
PRPF19-201ENST00000227524 DSELQ8IZU8 1212 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 KYQ8NBH2 561 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 URGCPQ8TCY9 931 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 NMD3Q96D46 503 aaKnown RBP17.81■□□□□ 0.44
PRPF19-201ENST00000227524 ILKAPQ9H0C8 392 aaPredicted RBP17.81■□□□□ 0.44
PRPF19-201ENST00000227524 Q9H521 79 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 OCEL1Q9H607 264 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 WDR55Q9H6Y2 383 aaPredicted RBP17.81■□□□□ 0.44
PRPF19-201ENST00000227524 NMRAL1Q9HBL8 299 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 TMPRSS4Q9NRS4 437 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 UBAP1Q9NZ09 502 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 RGSL1A5PLK6 1076 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 MANSC4A6NHS7 340 aaPredicted RBP17.81■□□□□ 0.44
PRPF19-201ENST00000227524 PDLIM1O00151 329 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 MATN2O00339 956 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 NEMP1O14524 444 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 CHRNGP07510 517 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 MMP3P08254 477 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 XRCC1P18887 633 aaPredicted RBP17.81■□□□□ 0.44
PRPF19-201ENST00000227524 MATKP42679 507 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 MRPS22P82650 360 aaKnown RBP17.81■□□□□ 0.44
PRPF19-201ENST00000227524 TAF1CQ15572 869 aaPredicted RBP17.81■□□□□ 0.44
PRPF19-201ENST00000227524 CNGA3Q16281 694 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 ZNF423Q2M1K9 1284 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 PSTKQ8IV42 348 aaKnown RBP17.81■□□□□ 0.44
PRPF19-201ENST00000227524 DEFB106AQ8N104 65 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 SLC7A14Q8TBB6 771 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 NLRP7Q8WX94 980 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 LRGUKQ96M69 825 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 ZMAT2Q96NC0 199 aaKnown RBP17.81■□□□□ 0.44
PRPF19-201ENST00000227524 GPBP1L1Q9HC44 474 aaPredicted RBP17.81■□□□□ 0.44
PRPF19-201ENST00000227524 TUBGCP4Q9UGJ1 667 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 RIMS3Q9UJD0 308 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 RAB26Q9ULW5 256 aa17.81■□□□□ 0.44
PRPF19-201ENST00000227524 ZCWPW2A0A1B0GU75 182 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 H3BRB1 525 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 USP12O75317 370 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 CRTAMO95727 393 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 C2P06681 752 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 ACADSBP45954 432 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 FLOT2Q14254 428 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 FRG1Q14331 258 aaKnown RBP17.8■□□□□ 0.44
PRPF19-201ENST00000227524 PAFAH1B3Q15102 231 aaKnown RBP17.8■□□□□ 0.44
PRPF19-201ENST00000227524 SLC25A52Q3SY17 297 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 PIGGQ5H8A4 983 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 PRAMEF19Q5SWL8 479 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 OTUD1Q5VV17 481 aaPredicted RBP17.8■□□□□ 0.44
PRPF19-201ENST00000227524 RGMBQ6NW40 437 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 ZFP1Q6P2D0 407 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 C17orf99Q6UX52 265 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 PID1Q7Z2X4 250 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 TMEM135Q86UB9 458 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 TMEM126BQ8IUX1 230 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 TP53INP2Q8IXH6 220 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 DRAXINQ8NBI3 349 aaPredicted RBP17.8■□□□□ 0.44
PRPF19-201ENST00000227524 DGCR14Q96DF8 476 aaKnown RBP17.8■□□□□ 0.44
PRPF19-201ENST00000227524 CDRT15Q96T59 188 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 TUT1Q9H6E5 874 aaKnown RBP17.8■□□□□ 0.44
PRPF19-201ENST00000227524 OXSMQ9NWU1 459 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 VPS28Q9UK41 221 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 VANGL2Q9ULK5 521 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 RAP2CQ9Y3L5 183 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 RGS2P41220 211 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 RPL5P46777 297 aaKnown RBP17.8■□□□□ 0.44
PRPF19-201ENST00000227524 MAP2K5Q13163 448 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 MAP7Q14244 749 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 LSM12Q3MHD2 195 aaKnown RBP17.8■□□□□ 0.44
PRPF19-201ENST00000227524 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.8■□□□□ 0.44
PRPF19-201ENST00000227524 TICAM1Q8IUC6 712 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 RP9Q8TA86 221 aaKnown RBP17.8■□□□□ 0.44
PRPF19-201ENST00000227524 MPP4Q96JB8 637 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 PPP1R36Q96LQ0 422 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 ZNF385DQ9H6B1 395 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 KLHL8Q9P2G9 620 aaPredicted RBP17.8■□□□□ 0.44
PRPF19-201ENST00000227524 MID2Q9UJV3 735 aa17.8■□□□□ 0.44
PRPF19-201ENST00000227524 VILLO15195 856 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 HDAC3O15379 428 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 CREB3O43889 395 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 AP2A1O95782 977 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 TFAP2AP05549 437 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 PDGFRBP09619 1106 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 PITX1P78337 314 aaPredicted RBP17.79■□□□□ 0.44
PRPF19-201ENST00000227524 CYLC2Q14093 348 aaPredicted RBP17.79■□□□□ 0.44
PRPF19-201ENST00000227524 HSP90AA5PQ58FG0 334 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 MARCH8Q5T0T0 291 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 SEL1L3Q68CR1 1132 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 IQSEC1Q6DN90 963 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 RBM44Q6ZP01 1051 aaKnown RBP17.79■□□□□ 0.44
PRPF19-201ENST00000227524 IFNL1Q8IU54 200 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 CPSF7Q8N684 471 aaKnown RBP17.79■□□□□ 0.44
PRPF19-201ENST00000227524 CATSPER1Q8NEC5 780 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 ACVR1CQ8NER5 493 aa17.79■□□□□ 0.44
PRPF19-201ENST00000227524 NDRG1Q92597 394 aaKnown RBP17.79■□□□□ 0.44
PRPF19-201ENST00000227524 RCN3Q96D15 328 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms