RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 MYO1FO00160 1098 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 SMAD6O43541 496 aaKnown RBP12.98□□□□□ -0.33
LSM5-201ENST00000223084 ATP9BO43861 1147 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 BNIP3LO60238 219 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 ZNF217O75362 1048 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 ZMPSTE24O75844 475 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 RHOBTB1O94844 696 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 RETP07949 1114 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 TMEM253P0C7T8 217 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 ACADMP11310 421 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 PCK1P35558 622 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 NNMTP40261 264 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 SSR1P43307 286 aaKnown RBP12.98□□□□□ -0.33
LSM5-201ENST00000223084 DHPSP49366 369 aaPredicted RBP12.98□□□□□ -0.33
LSM5-201ENST00000223084 TPMTP51580 245 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 SPEM2Q0P670 501 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 ACAP1Q15027 740 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 ELF2Q15723 593 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 PPP6R3Q5H9R7 873 aaPredicted RBP12.98□□□□□ -0.33
LSM5-201ENST00000223084 IL31Q6EBC2 164 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 ZNF783Q6ZMS7 281 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 LEKR1Q6ZMV7 388 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 ARMCX6Q7L4S7 300 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 FAM124AQ86V42 546 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 SH2D3CQ8N5H7 860 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 NIPA2Q8N8Q9 360 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 RTL3Q8N8U3 475 aaKnown RBP12.98□□□□□ -0.33
LSM5-201ENST00000223084 ATP11CQ8NB49 1132 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 HSPH1Q92598 858 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 ARHGEF2Q92974 986 aaKnown RBP12.98□□□□□ -0.33
LSM5-201ENST00000223084 FAM129BQ96TA1 746 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 ANP32EQ9BTT0 268 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 C2orf49Q9BVC5 232 aaPredicted RBP12.98□□□□□ -0.33
LSM5-201ENST00000223084 RSPH9Q9H1X1 276 aaPredicted RBP12.98□□□□□ -0.33
LSM5-201ENST00000223084 ARRDC1-AS1Q9H2J1 176 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 NOL6Q9H6R4 1146 aaKnown RBP12.98□□□□□ -0.33
LSM5-201ENST00000223084 PARD6AQ9NPB6 346 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 ITM2CQ9NQX7 267 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 SPTBN4Q9H254 2564 aa12.98□□□□□ -0.33
LSM5-201ENST00000223084 FRYLO94915 3013 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 TARSL2A2RTX5 802 aaKnown RBP12.97□□□□□ -0.33
LSM5-201ENST00000223084 EEF2KO00418 725 aaKnown RBP12.97□□□□□ -0.33
LSM5-201ENST00000223084 RAMP2O60895 175 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 EPN2O95208 641 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 SRCP12931 536 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 GOT1P17174 413 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 PTGER3P43115 390 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 ARF5P84085 180 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 RPL6Q02878 288 aaKnown RBP12.97□□□□□ -0.33
LSM5-201ENST00000223084 POLD3Q15054 466 aaPredicted RBP12.97□□□□□ -0.33
LSM5-201ENST00000223084 ZNF776Q68DI1 518 aaPredicted RBP12.97□□□□□ -0.33
LSM5-201ENST00000223084 Q6ZVU0 165 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 LPCAT2Q7L5N7 544 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 METTL3Q86U44 580 aaKnown RBP12.97□□□□□ -0.33
LSM5-201ENST00000223084 C11orf74Q86VG3 221 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 MMAAQ8IVH4 418 aaKnown RBP12.97□□□□□ -0.33
LSM5-201ENST00000223084 KIAA2013Q8IYS2 634 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 SPC24Q8NBT2 197 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 NETO2Q8NC67 525 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 SLC35G2Q8TBE7 412 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 TOE1Q96GM8 510 aaKnown RBP12.97□□□□□ -0.33
LSM5-201ENST00000223084 PANX2Q96RD6 677 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 ACE2Q9BYF1 805 aaPredicted RBP12.97□□□□□ -0.33
LSM5-201ENST00000223084 KLC2Q9H0B6 622 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 SMOC1Q9H4F8 434 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 CATSPERBQ9H7T0 1116 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 FBRSQ9HAH7 460 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 UVRAGQ9P2Y5 699 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 TFR2Q9UP52 801 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 HS3ST2Q9Y278 367 aa12.97□□□□□ -0.33
LSM5-201ENST00000223084 NYNRINQ9P2P1 1898 aaKnown RBP12.97□□□□□ -0.33
LSM5-201ENST00000223084 SOWAHDA6NJG2 315 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 WASH4PA8MWX3 477 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 MID1O15344 667 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 DAPK3O43293 454 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 NDUFS2O75306 463 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 PROSCO94903 275 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 CD160O95971 181 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 DNTTP04053 509 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 RARAP10276 462 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 TGM1P22735 817 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 CD6P30203 668 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 GJC1P36383 396 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 PI4KAP42356 2102 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 PSMD8P48556 350 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 METAP1P53582 386 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 CREB5Q02930 508 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 SLC25A11Q02978 314 aaKnown RBP12.96□□□□□ -0.33
LSM5-201ENST00000223084 MESDQ14696 234 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 BOLA3Q53S33 107 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 SLC36A4Q6YBV0 504 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 RFX8Q6ZV50 586 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 ZNF354CQ86Y25 554 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 HMCESQ96FZ2 354 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 CELF6Q96J87 481 aaKnown RBP12.96□□□□□ -0.33
LSM5-201ENST00000223084 LOXL4Q96JB6 756 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 NCAPGQ9BPX3 1015 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 MAGEH1Q9H213 219 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 TNKS2Q9H2K2 1166 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 PABPC3Q9H361 631 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms