RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 C14orf80Q86SX3 495 aa17.99■□□□□ 0.47
GCDH-201ENST00000222214 STKLD1Q8NE28 680 aa17.99■□□□□ 0.47
GCDH-201ENST00000222214 PDZD8Q8NEN9 1154 aa17.99■□□□□ 0.47
GCDH-201ENST00000222214 FBXO22Q8NEZ5 403 aa17.99■□□□□ 0.47
GCDH-201ENST00000222214 RAB3IL1Q8TBN0 382 aa17.99■□□□□ 0.47
GCDH-201ENST00000222214 OVCA2Q8WZ82 227 aa17.99■□□□□ 0.47
GCDH-201ENST00000222214 ZNF669Q96BR6 464 aaPredicted RBP17.99■□□□□ 0.47
GCDH-201ENST00000222214 RETREG1Q9H6L5 497 aa17.99■□□□□ 0.47
GCDH-201ENST00000222214 RXFP1Q9HBX9 757 aa17.99■□□□□ 0.47
GCDH-201ENST00000222214 PIH1D1Q9NWS0 290 aaKnown RBP17.99■□□□□ 0.47
GCDH-201ENST00000222214 USH1CQ9Y6N9 552 aa17.99■□□□□ 0.47
GCDH-201ENST00000222214 HMX2A2RU54 273 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 USP12O75317 370 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 VNN2O95498 520 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 TROVE2P10155 538 aaKnown RBP eCLIP17.98■□□□□ 0.47
GCDH-201ENST00000222214 SERPINB4P48594 390 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 PAPOLAP51003 745 aaKnown RBP17.98■□□□□ 0.47
GCDH-201ENST00000222214 BMPR2Q13873 1038 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 HNRNPDQ14103 355 aaKnown RBP17.98■□□□□ 0.47
GCDH-201ENST00000222214 ANKRD20A4Q4UJ75 823 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 CNKSR3Q6P9H4 555 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 ARHGAP36Q6ZRI8 547 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 MICALL1Q8N3F8 863 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 SLCO1B3Q9NPD5 702 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 ENTPD7Q9NQZ7 604 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 NSMCE4AQ9NXX6 385 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 MPP6Q9NZW5 540 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 HCSTQ9UBK5 93 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 IPO11Q9UI26 975 aaKnown RBP17.98■□□□□ 0.47
GCDH-201ENST00000222214 HBS1LQ9Y450 684 aaKnown RBP17.98■□□□□ 0.47
GCDH-201ENST00000222214 CDY1Q9Y6F8 540 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 DOCK4Q8N1I0 1966 aa17.98■□□□□ 0.47
GCDH-201ENST00000222214 CARNS1A5YM72 827 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 SLC38A8A6NNN8 435 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 NEFHP12036 1026 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 RFC2P35250 354 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 SCTRP47872 440 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 RENBPP51606 427 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 PSMD5Q16401 504 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 KYAT3Q6YP21 454 aaKnown RBP17.97■□□□□ 0.47
GCDH-201ENST00000222214 TMEM173Q86WV6 379 aaPredicted RBP17.97■□□□□ 0.47
GCDH-201ENST00000222214 NDUFAF2Q8N183 169 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 GPR152Q8TDT2 470 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 PTCD2Q8WV60 388 aaKnown RBP17.97■□□□□ 0.47
GCDH-201ENST00000222214 SPOCK2Q92563 424 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 TBL1YQ9BQ87 522 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 CRISPLD1Q9H336 500 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 NDFIP2Q9NV92 336 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 RBM22Q9NW64 420 aaKnown RBP eCLIP17.97■□□□□ 0.479e-6■□□□□ 9.6
GCDH-201ENST00000222214 SLC12A4Q9UP95 1085 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 ZCWPW2A0A1B0GU75 182 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 SLC12A8A0AV02 714 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 DRGXA6NNA5 263 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 H0YHG0 523 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 SOAT2O75908 522 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 ITGA2BP08514 1039 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 SPRP35270 261 aaPredicted RBP17.97■□□□□ 0.47
GCDH-201ENST00000222214 ATN1P54259 1190 aaPredicted RBP17.97■□□□□ 0.47
GCDH-201ENST00000222214 RASIP1Q5U651 963 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 OTOP3Q7RTS5 596 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 OTOAQ7RTW8 1153 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 RNF168Q8IYW5 571 aaPredicted RBP17.97■□□□□ 0.47
GCDH-201ENST00000222214 USP33Q8TEY7 942 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 FCRL3Q96P31 734 aaPredicted RBP17.97■□□□□ 0.47
GCDH-201ENST00000222214 BEGAINQ9BUH8 593 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 KIFC1Q9BW19 673 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 PPP1R12CQ9BZL4 782 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 PCMTD2Q9NV79 361 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 CAPN7Q9Y6W3 813 aa17.97■□□□□ 0.47
GCDH-201ENST00000222214 BIRC5O15392 142 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 ATP9BO43861 1147 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 TLR5O60602 858 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 GLRA3O75311 464 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 DCTN3O75935 186 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 TGDSO95455 350 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 MPP3Q13368 585 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 PCID2Q5JVF3 399 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 SNX30Q5VWJ9 437 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 POTEHQ6S545 545 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 TAS1R1Q7RTX1 841 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 DEFB128Q7Z7B8 93 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 MIB1Q86YT6 1006 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 UNC5BQ8IZJ1 945 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 BCL7CQ8WUZ0 217 aaPredicted RBP17.96■□□□□ 0.47
GCDH-201ENST00000222214 NSMCE1Q8WV22 266 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 SLC13A1Q9BZW2 595 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 ABCF3Q9NUQ8 709 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 DCDC2Q9UHG0 476 aa17.96■□□□□ 0.47
GCDH-201ENST00000222214 NYNRINQ9P2P1 1898 aaKnown RBP17.96■□□□□ 0.47
GCDH-201ENST00000222214 WDR91A4D1P6 747 aa17.95■□□□□ 0.46
GCDH-201ENST00000222214 DNAJC8O75937 253 aaPredicted RBP17.95■□□□□ 0.46
GCDH-201ENST00000222214 ERVK-10P10266 1014 aa17.95■□□□□ 0.46
GCDH-201ENST00000222214 PBX3P40426 434 aa17.95■□□□□ 0.46
GCDH-201ENST00000222214 MAPKAPK2P49137 400 aa17.95■□□□□ 0.46
GCDH-201ENST00000222214 CSE1LP55060 971 aaKnown RBP17.95■□□□□ 0.46
GCDH-201ENST00000222214 PDE1BQ01064 536 aa17.95■□□□□ 0.46
GCDH-201ENST00000222214 TLE2Q04725 743 aa17.95■□□□□ 0.46
GCDH-201ENST00000222214 TNK2Q07912 1038 aa17.95■□□□□ 0.46
GCDH-201ENST00000222214 OLIG2Q13516 323 aa17.95■□□□□ 0.46
GCDH-201ENST00000222214 SETDB1Q15047 1291 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms