RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 IZUMO2Q6UXV1 221 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 FRMD7Q6ZUT3 714 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 PDZD4Q76G19 769 aaPredicted RBP14.91□□□□□ -0.02
CNOT3-201ENST00000221232 CCNJLQ8IV13 435 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 DENND6AQ8IWF6 608 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 PPP1R10Q96QC0 940 aaKnown RBP14.91□□□□□ -0.02
CNOT3-201ENST00000221232 NAT9Q9BTE0 207 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 AP5M1Q9H0R1 490 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 FIS1Q9Y3D6 152 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 F8W810 466 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 GABRDO14764 452 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 ZBTB14O43829 449 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 MOCS2O96007 188 aaPredicted RBP14.91□□□□□ -0.02
CNOT3-201ENST00000221232 THP07101 528 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 LIMK2P53671 638 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 ADAM17P78536 824 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 USP10Q14694 798 aaKnown RBP14.91□□□□□ -0.02
CNOT3-201ENST00000221232 ARL13BQ3SXY8 428 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 DNAL1Q4LDG9 190 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 TIGD5Q53EQ6 642 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 XKR4Q5GH76 650 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 SMYD5Q6GMV2 418 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 NET1Q7Z628 596 aaPredicted RBP14.91□□□□□ -0.02
CNOT3-201ENST00000221232 CNTD1Q8N815 330 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 RAB3IL1Q8TBN0 382 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 KCTD13Q8WZ19 329 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 SYT17Q9BSW7 474 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 FTHL17Q9BXU8 183 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 NMRAL1Q9HBL8 299 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 SFMBT1Q9UHJ3 866 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 CDY2AQ9Y6F7 541 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 AIM2O14862 343 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 MSI1O43347 362 aaKnown RBP14.91□□□□□ -0.02
CNOT3-201ENST00000221232 B3GAT3O94766 335 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 AOC1P19801 751 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 EPHA3P29320 983 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 PGFP49763 221 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 SERPINB8P50452 374 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 CCNHP51946 323 aaPredicted RBP14.91□□□□□ -0.02
CNOT3-201ENST00000221232 ACTR3P61158 418 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 RNF220Q5VTB9 566 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 LPCAT4Q643R3 524 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 NXNQ6DKJ4 435 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 ZNF280DQ6N043 979 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 ISLR2Q6UXK2 745 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 TMEM135Q86UB9 458 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 TAC4Q86UU9 113 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 SLC41A1Q8IVJ1 513 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 TDRD5Q8NAT2 981 aaKnown RBP14.91□□□□□ -0.02
CNOT3-201ENST00000221232 GTF3C2Q8WUA4 911 aaPredicted RBP14.91□□□□□ -0.02
CNOT3-201ENST00000221232 VPS39Q96JC1 886 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 CORO1CQ9ULV4 474 aaPredicted RBP14.91□□□□□ -0.02
CNOT3-201ENST00000221232 RUVBL2Q9Y230 463 aaKnown RBP14.91□□□□□ -0.02
CNOT3-201ENST00000221232 DOCK3Q8IZD9 2030 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 A6NHS1 94 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 G3V2L1 256 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 ZNF195O14628 629 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 PMPCBO75439 489 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 KLHL2O95198 593 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 ZNF865P0CJ78 1059 aaPredicted RBP14.9□□□□□ -0.02
CNOT3-201ENST00000221232 GRK2P25098 689 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 CACNB2Q08289 660 aaPredicted RBP14.9□□□□□ -0.02
CNOT3-201ENST00000221232 PPIDQ08752 370 aaKnown RBP14.9□□□□□ -0.02
CNOT3-201ENST00000221232 CXCL17Q6UXB2 119 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 LIMS2Q7Z4I7 341 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 KCTD4Q8WVF5 259 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 MYLPFQ96A32 169 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 GATA5Q9BWX5 397 aaPredicted RBP14.9□□□□□ -0.02
CNOT3-201ENST00000221232 SPON1Q9HCB6 807 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 FAM105AQ9NUU6 356 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 NDE1Q9NXR1 346 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 PLXNA1Q9UIW2 1896 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 VAPBO95292 243 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 NAGLUP54802 743 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 AP2B1P63010 937 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 MPP1Q00013 466 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 NOMO2Q5JPE7 1267 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 PPM1LQ5SGD2 360 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 FAM91A1Q658Y4 838 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 RNF135Q8IUD6 432 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 RNF148Q8N7C7 305 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 NUF2Q9BZD4 464 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 GBA3Q9H227 469 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 CASS4Q9NQ75 786 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 NDFIP2Q9NV92 336 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 TMLHEQ9NVH6 421 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 SLC2A6Q9UGQ3 507 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 TLK1Q9UKI8 766 aa14.9□□□□□ -0.02
CNOT3-201ENST00000221232 ARL5CA6NH57 179 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 SERPINB6P35237 376 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 PCSK7Q16549 785 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 TRMT5Q32P41 509 aaKnown RBP14.89□□□□□ -0.03
CNOT3-201ENST00000221232 TMEM198Q66K66 360 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 BNIPLQ7Z465 357 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 MYLK4Q86YV6 388 aaPredicted RBP14.89□□□□□ -0.03
CNOT3-201ENST00000221232 CCNYL1Q8N7R7 359 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 FAM136AQ96C01 138 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 PARK7Q99497 189 aaKnown RBP14.89□□□□□ -0.03
CNOT3-201ENST00000221232 EPAS1Q99814 870 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 ZNF212Q9UDV6 495 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms