RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 ULK2Q8IYT8 1036 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 SPATA22Q8NHS9 363 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 MIPOL1Q8TD10 442 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 SYT17Q9BSW7 474 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 PRDM16Q9HAZ2 1276 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 PIGVQ9NUD9 493 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 KIF1CO43896 1103 aaKnown RBP12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 PLIN3O60664 434 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 H2AFYO75367 372 aaKnown RBP12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 RHOBTB1O94844 696 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 ENDOD1O94919 500 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 SNAI1O95863 264 aaPredicted RBP12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 HADHAP40939 763 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 PKNOX1P55347 436 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 FCGRTP55899 365 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 SEMA5AQ13591 1074 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 AP1ARQ63HQ0 302 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 TAPT1Q6NXT6 567 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 CRYBG2Q8N1P7 616 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 LZTR1Q8N653 840 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 OLIG1Q8TAK6 271 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 RAET1EQ8TD07 263 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 FCRL2Q96LA5 508 aaPredicted RBP12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 CDRT15Q96T59 188 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 NDNQ99608 321 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 EBF4Q9BQW3 602 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 GEMIN8Q9NWZ8 242 aaKnown RBP12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 COPG2Q9UBF2 871 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 FZD10Q9ULW2 581 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 PLA2G4CQ9UP65 541 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 CRYL1Q9Y2S2 319 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 DTNAQ9Y4J8 743 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 ADAMTSL1Q8N6G6 1762 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 MAGEA13PA6NCF6 341 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 TPST1O60507 370 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 GRIA4P48058 902 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 PITX1P78337 314 aaPredicted RBP12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 AGKQ53H12 422 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 PCID2Q5JVF3 399 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 SLC9A4Q6AI14 798 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 MRNIPQ6NTE8 343 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 CAND1Q86VP6 1230 aaKnown RBP12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 NUP93Q8N1F7 819 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 GSTCDQ8NEC7 633 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 AGAP2Q99490 1192 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 EGFL8Q99944 293 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 FAM124BQ9H5Z6 455 aaPredicted RBP12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 WDR55Q9H6Y2 383 aaPredicted RBP12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 ABCC13Q9NSE7 274 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 NDFIP2Q9NV92 336 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 PTCH2Q9Y6C5 1203 aa12.57□□□□□ -0.4
TM9SF4-201ENST00000217315 F8W8V4 182 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 KPNA6O60684 536 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 FGFR1P11362 822 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 STX5Q13190 355 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 CDHR3Q6ZTQ4 885 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 DENND1AQ8TEH3 1009 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 ANKRD27Q96NW4 1050 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 SERPINB11Q96P15 392 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 ZNF184Q99676 751 aaPredicted RBP12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 SIKE1Q9BRV8 207 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 MUC3BQ9H195 1237 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 VRTNQ9H8Y1 702 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 RAMP2O60895 175 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 DNAJC6O75061 913 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 OR1E1P30953 314 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 RPL14P50914 215 aaKnown RBP12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 DAOAP59103 153 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 ZNF792Q3KQV3 632 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 ISLR2Q6UXK2 745 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 RNF180Q86T96 592 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 SDCCAG3Q96C92 435 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 TUBGCP3Q96CW5 907 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 MMADHCQ9H3L0 296 aaPredicted RBP12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 TBC1D13Q9NVG8 400 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 XPR1Q9UBH6 696 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 UBR3Q6ZT12 1888 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 GLTPD2A6NH11 291 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 SLCO1B7G3V0H7 640 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 GNGT2O14610 69 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 AKAP10O43572 662 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 MT-CYBP00156 380 aaPredicted RBP12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 OR4Q2P0C623 313 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 ATP6V1B1P15313 513 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 CHRM3P20309 590 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 PTPN3P26045 913 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 PTK2BQ14289 1009 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 PRKD1Q15139 912 aaPredicted RBP12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 RBBP7Q16576 425 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 CCL14Q16627 93 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 FAM171A1Q5VUB5 890 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 CLEC20AQ6ZU45 233 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 NPLOC4Q8TAT6 608 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 SIGLEC10Q96LC7 697 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 ENTPD7Q9NQZ7 604 aa12.56□□□□□ -0.4
TM9SF4-201ENST00000217315 NCF1BA6NI72 391 aaPredicted RBP12.55□□□□□ -0.4
TM9SF4-201ENST00000217315 NCF1CA8MVU1 366 aaPredicted RBP12.55□□□□□ -0.4
TM9SF4-201ENST00000217315 E7ESA3 106 aa12.55□□□□□ -0.4
TM9SF4-201ENST00000217315 AP2A1O95782 977 aa12.55□□□□□ -0.4
TM9SF4-201ENST00000217315 NCF1P14598 390 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms