RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 POMPQ9Y244 141 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 NEMP2A6NFY4 417 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 STX16-NPEPL1H3BU86 382 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 TRIM13O60858 407 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 RNASEH1O60930 286 aaKnown RBP8.45□□□□□ -1.06
CDC27-201ENST00000066544 DAB1O75553 588 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 VAPBO95292 243 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 COX4I1P13073 169 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 ITGAXP20702 1163 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 CD68P34810 354 aaPredicted RBP8.45□□□□□ -1.06
CDC27-201ENST00000066544 SERPINB8P50452 374 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 CACNB2Q08289 660 aaPredicted RBP8.45□□□□□ -1.06
CDC27-201ENST00000066544 SLC41A1Q8IVJ1 513 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 FAM156AQ8NDB6 213 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 ACE2Q9BYF1 805 aaPredicted RBP8.45□□□□□ -1.06
CDC27-201ENST00000066544 CYP4F12Q9HCS2 524 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 TCF7L2Q9NQB0 619 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 SPATS2LQ9NUQ6 558 aaKnown RBP8.45□□□□□ -1.06
CDC27-201ENST00000066544 OR12D3Q9UGF7 316 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 DOCK3Q8IZD9 2030 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 F8W8V4 182 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 LIN7AO14910 233 aaPredicted RBP8.45□□□□□ -1.06
CDC27-201ENST00000066544 LRIG2O94898 1065 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 AQP4P55087 323 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 MPP1Q00013 466 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 CCNIQ14094 377 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 PTAR1Q7Z6K3 402 aaPredicted RBP8.45□□□□□ -1.06
CDC27-201ENST00000066544 ZNF483Q8TF39 744 aaPredicted RBP8.45□□□□□ -1.06
CDC27-201ENST00000066544 CPNE1Q99829 537 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 SMOQ99835 787 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 NAT9Q9BTE0 207 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 WDCPQ9H6R7 721 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 ZCWPW2A0A1B0GU75 182 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 PLK1P53350 603 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 LIMK2P53671 638 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 PCSK7Q16549 785 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 ARL13AQ5H913 290 aaPredicted RBP8.45□□□□□ -1.06
CDC27-201ENST00000066544 OR52E8Q6IFG1 317 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 DHDDSQ86SQ9 333 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 GDPD5Q8WTR4 605 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 PCED1BQ96HM7 432 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 GCNAQ96QF7 691 aa8.45□□□□□ -1.06
CDC27-201ENST00000066544 HNRNPABQ99729 332 aaKnown RBP8.45□□□□□ -1.06
CDC27-201ENST00000066544 MAGEA13PA6NCF6 341 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 XPOTO43592 962 aaKnown RBP8.44□□□□□ -1.06
CDC27-201ENST00000066544 AP2A1O95782 977 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 GRIK3Q13003 919 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 C9orf131Q5VYM1 1079 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 FOXB2Q5VYV0 432 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 FAM91A1Q658Y4 838 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 APBB2Q92870 758 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 CMTM5Q96DZ9 223 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 TSNARE1Q96NA8 513 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 KATNBL1Q9H079 304 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 TSPYL2Q9H2G4 693 aaPredicted RBP8.44□□□□□ -1.06
CDC27-201ENST00000066544 PAPOLBQ9NRJ5 636 aaKnown RBP8.44□□□□□ -1.06
CDC27-201ENST00000066544 CPA4Q9UI42 421 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 RUVBL2Q9Y230 463 aaKnown RBP8.44□□□□□ -1.06
CDC27-201ENST00000066544 PTGESO14684 152 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 DCLK1O15075 740 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 GRIA4P48058 902 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 PSEN1P49768 467 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 MRPS22P82650 360 aaKnown RBP8.44□□□□□ -1.06
CDC27-201ENST00000066544 DPYSQ14117 519 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 NOMO2Q5JPE7 1267 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 SPANXN3Q5MJ09 141 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 GRTP1Q5TC63 336 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 CDRT15Q96T59 188 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 GORASP1Q9BQQ3 440 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 ABHD16BQ9H3Z7 469 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 CDY2AQ9Y6F7 541 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 CDY1Q9Y6F8 540 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 CAPN8A6NHC0 703 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 CCL22O00626 93 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 BDNFP23560 247 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 CHRNA4P43681 627 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 GLUD2P49448 558 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 DLG1Q12959 904 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 UBXN11Q5T124 520 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 SLC30A9Q6PML9 568 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 PDZD4Q76G19 769 aaPredicted RBP8.44□□□□□ -1.06
CDC27-201ENST00000066544 FAM35AQ86V20 835 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 ZMIZ2Q8NF64 920 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 RAB3IL1Q8TBN0 382 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 TMA16Q96EY4 203 aaKnown RBP8.44□□□□□ -1.06
CDC27-201ENST00000066544 COLEC11Q9BWP8 271 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 CDH19Q9H159 772 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 WDR6Q9NNW5 1121 aaKnown RBP8.44□□□□□ -1.06
CDC27-201ENST00000066544 ARHGAP26Q9UNA1 814 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 G3V2L1 256 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 ZNF195O14628 629 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 CLCNKBP51801 687 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 DAOAP59103 153 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 OR6Y1Q8NGX8 325 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 DERAQ9Y315 318 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 PCDHB12Q9Y5F1 795 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 NRCAMQ92823 1304 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 COL1A2P08123 1366 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 ANKRD12Q6UB98 2062 aa8.44□□□□□ -1.06
CDC27-201ENST00000066544 RRN3P2A6NIE6 340 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms