RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 CORO1AP31146 461 aaKnown RBP10.52□□□□□ -0.72
NIPAL3-201ENST00000003912 DNAJC3Q13217 504 aa10.52□□□□□ -0.72
NIPAL3-201ENST00000003912 GPM6BQ13491 265 aa10.52□□□□□ -0.72
NIPAL3-201ENST00000003912 AFTPHQ6ULP2 937 aa10.52□□□□□ -0.72
NIPAL3-201ENST00000003912 KREMEN2Q8NCW0 462 aa10.52□□□□□ -0.72
NIPAL3-201ENST00000003912 BAP1Q92560 729 aa10.52□□□□□ -0.72
NIPAL3-201ENST00000003912 ERP27Q96DN0 273 aa10.52□□□□□ -0.72
NIPAL3-201ENST00000003912 PRDM12Q9H4Q4 367 aa10.52□□□□□ -0.72
NIPAL3-201ENST00000003912 MIEF1Q9NQG6 463 aa10.52□□□□□ -0.72
NIPAL3-201ENST00000003912 PNMA8BQ9ULN7 279 aaPredicted RBP10.52□□□□□ -0.72
NIPAL3-201ENST00000003912 FAM47E-STBD1D6RA91 191 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 USP12O75317 370 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 KRT20P35900 424 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 PFKPQ01813 784 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 DMTNQ08495 405 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 ZNF655Q8N720 491 aaPredicted RBP10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 NAT16Q8N8M0 369 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 ICA1LQ8NDH6 482 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 HNRNPABQ99729 332 aaKnown RBP10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 NTPCRQ9BSD7 190 aaKnown RBP10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 THUMPD3Q9BV44 507 aaKnown RBP10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 MYO1GB0I1T2 1018 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 KATNA1O75449 491 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 HPGDP15428 266 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 HTR7P34969 479 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 MAD2L1Q13257 205 aaPredicted RBP10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 GDF6Q6KF10 455 aaPredicted RBP10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 AGGF1Q8N302 714 aaeCLIP10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 PLEKHA8Q96JA3 519 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 CHST7Q9NS84 486 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 POLG2Q9UHN1 485 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 PHRF1Q9P1Y6 1649 aaKnown RBP10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 C8AP07357 584 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 RPSAP08865 295 aaKnown RBP10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 AMD1P17707 334 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 TNNI3P19429 210 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 KELP23276 732 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 ABL2P42684 1182 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 RPL21P46778 160 aaKnown RBP10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 IL2P60568 153 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 CRY1Q16526 586 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 TPGS2Q68CL5 300 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 NPNTQ6UXI9 565 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 BBS12Q6ZW61 710 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 CEP19Q96LK0 163 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 FAM126AQ9BYI3 521 aaPredicted RBP10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 IL1RL2Q9HB29 575 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 CDHR5Q9HBB8 845 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 ZMYM5Q9UJ78 669 aa10.52□□□□□ -0.73
NIPAL3-201ENST00000003912 A0A087X1B8 175 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 CST3P01034 146 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 TTPAP49638 278 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 C21orf59P57076 290 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 GJA9P57773 515 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 PURAQ00577 322 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 POM121L1PQ3SYA9 428 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 PARP15Q460N3 678 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 SAPCD2Q86UD0 394 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 HORMAD1Q86X24 394 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 OR56A4Q8NGH8 313 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 ZNF296Q8WUU4 475 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 CXorf40BQ96DE9 158 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 PAWRQ96IZ0 340 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 MAGEB18Q96M61 343 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 NR1H4Q96RI1 486 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 NDOR1Q9UHB4 597 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 SOX13Q9UN79 622 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 FAF1Q9UNN5 650 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 STARD13Q9Y3M8 1113 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 SNED1Q8TER0 1413 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 LRP6O75581 1613 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 C1orf232A0A0U1RR37 186 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 BTN3A1O00481 513 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 LSP1P33241 339 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 RPL7AP62424 266 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 MAP3K10Q02779 954 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 PAGE2BQ5JRK9 111 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 CES3Q6UWW8 571 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 MARK2Q7KZI7 788 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 ZCCHC9Q8N567 271 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 ELMO1Q92556 727 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 KREMEN1Q96MU8 473 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 TMEM175Q9BSA9 504 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 CCDC90BQ9GZT6 254 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 HBS1LQ9Y450 684 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 A0A096LPK6 155 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 A0A1W2PQ45 241 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 A0A1W2PQY0 241 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 CACNB4O00305 520 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 EPHB6O15197 1021 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 HNRNPRO43390 633 aaKnown RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 AKAP10O43572 662 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 FTH1P02794 183 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 COL9A3Q14050 684 aaPredicted RBP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 LAYNQ6UX15 382 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 ZNF555Q8NEP9 628 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 OR52K1Q8NGK4 314 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 FUBP3Q96I24 572 aaKnown RBP eCLIP10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 GPR88Q9GZN0 384 aa10.51□□□□□ -0.73
NIPAL3-201ENST00000003912 GPSM3Q9Y4H4 160 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms