RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Hmga1P17095 107 aaKnown RBP16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Six4Q61321 775 aa16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ltbp3Q61810 1268 aa16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 SnrpaQ62189 287 aaKnown RBP16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Olfr20Q7TRX9 314 aa16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Smarcal1Q8BJL0 910 aa16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Samd3Q8C4H2 520 aa16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Taf10Q8K0H5 218 aa16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Atp11cQ9QZW0 1129 aa16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Plod1Q9R0E2 728 aa16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Slfn2Q9Z0I6 378 aa16.21■□□□□ 0.18
Trim39-203ENSMUST00000113706 Zscan5bB2RTN3 468 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Casp8O89110 480 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ccna2P51943 422 aaKnown RBP16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Tmem65Q4VAE3 234 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Serpinb1cQ5SV42 375 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Dpy19l3Q71B07 716 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Tas2r129Q7M709 320 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Sept10Q8C650 452 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Igsf8Q8R366 611 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 HgsQ99LI8 775 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Pin4Q9CWW6 131 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Commd8Q9CZG3 183 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Q9D454 513 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Q9D979 236 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 PignQ9R1S3 931 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Axin1O35625 863 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Cd2P08920 344 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Gsta4P24472 222 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 AxlQ00993 888 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Serpina6Q06770 397 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Glt6d1Q2NKH9 311 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Asb14Q8C6Y6 587 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Vangl2Q91ZD4 521 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Sike1Q9CPR7 207 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Oma1Q9D8H7 521 aa16.2■□□□□ 0.18
Trim39-203ENSMUST00000113706 Gm14496K7N5U4 849 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Exoc7O35250 697 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 P01641 117 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Akr1b7P21300 316 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 GmncQ3URY2 333 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Nomo1Q6GQT9 1214 aaKnown RBP16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Olfr299Q7TS05 330 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Mib1Q80SY4 1006 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Wasf2Q8BH43 497 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Mfsd14bQ8CIA9 507 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Wrnip1Q91XU0 660 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 AadacQ99PG0 398 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Cdkn2aipnlQ9D211 116 aaKnown RBP16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Pgam1Q9DBJ1 254 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 D7h11orf16Q9JJR6 402 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Zfp985A2A7A5 519 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Vmn2r72D3Z4N8 856 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Gm5415E9PXF3 478 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Scrg1O88745 98 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Atxn10P28658 475 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Lhx3P50481 400 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Grm6Q5NCH9 871 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 MafkQ61827 156 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Defb34Q7TNV8 81 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Chn2Q80XD1 332 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 ToporsQ80Z37 1033 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Znf365Q8BG89 408 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Tmtc3Q8BRH0 920 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Smoc2Q8CD91 447 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ccdc63Q8CDV6 558 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Sik2Q8CFH6 931 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Rpl17Q9CPR4 184 aaKnown RBP16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 TheglQ9DA15 459 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Hao1Q9WU19 370 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ptpn1P35821 432 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Zmym6Q8BS54 1249 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ifi205aQ8CGE8 404 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 LipmQ8K2A6 422 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Stk33Q924X7 491 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 LrgukQ9D5S7 820 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Mtm1Q9Z2C5 603 aa16.19■□□□□ 0.18
Trim39-203ENSMUST00000113706 Tp53bp1P70399 1969 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Klhdc7bA0A286YD60 1263 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Gm5689F6Y2A6 97 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Morc3F7BJB9 942 aaKnown RBP16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Chrna4O70174 629 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Cd247P24161 164 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Lrrn4P59383 733 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Uba1Q02053 1058 aaKnown RBP16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 E330034G19RikQ3UWX6 351 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Akap7Q7TN79 314 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Olfr533Q7TRT7 320 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ofcc1Q8BGX4 166 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 DdoQ922Z0 341 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Mrps18aQ99N85 196 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 ApipQ9WVQ5 241 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Tex13c2A0A0G2JGA3 530 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Rhox3cA2AWM0 215 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Apol8A2VDH7 339 aaKnown RBP16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Rhox3hL7MU37 215 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Eef1bO70251 225 aaKnown RBP16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Asgr1P34927 284 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Garnl3Q3V0G7 1038 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Rhox3aQ4TU90 215 aa16.18■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms