RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Sap130Q8BIH0 1057 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Dnajc5gQ8C632 165 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Dmtf1Q8CE22 761 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Trappc12Q8K2L8 797 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Vps4aQ8VEJ9 437 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Uckl1Q91YL3 548 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Asb6Q91ZU1 418 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cyp4f3Q99N16 524 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Arpc2Q9CVB6 300 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cd2bp2Q9CWK3 342 aaKnown RBP9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Hnrnpa0Q9CX86 305 aaKnown RBP9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pold3Q9EQ28 462 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ccr10Q9JL21 362 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 SqorQ9R112 450 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 IkQ9Z1M8 557 aaKnown RBP9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Scgb2b17S4R2V3 82 aa9.91□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Kndc1Q0KK55 1742 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pknox1O70477 436 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Stra6O70491 670 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 ItgamP05555 1153 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cd247P24161 164 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 DbtP53395 482 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Hsd17b3P70385 305 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Q3TTJ4 293 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gm45902Q3UDN3 361 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ccdc85aQ5SP85 500 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Bcap29Q61334 240 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Rbm38Q62176 237 aaKnown RBP9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 SnrpaQ62189 287 aaKnown RBP9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Bhlhb9Q6PB60 539 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pou6f2Q8BJI4 691 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cgrrf1Q8BMJ7 332 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Qsox1Q8BND5 748 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Slc44a2Q8BY89 706 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Chpt1Q8C025 398 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 KyQ8C8H8 661 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Sept8Q8CHH9 429 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Slco4a1Q8K078 723 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 ManbaQ8K2I4 879 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Chmp7Q8R1T1 451 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Vps11Q91W86 941 aaKnown RBP9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Dhrs4Q99LB2 279 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Scube2Q9JJS0 997 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Plch1Q4KWH5 1682 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Dock2Q8C3J5 1828 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 DgkdE9PUQ8 1220 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Mroh8E9PYI4 1049 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Kng1O08677 661 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Bnip3O55003 187 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Itm2bO89051 266 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cox4i1P19783 169 aaKnown RBP9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Pdcd5P56812 126 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Brms1lQ3U1T3 323 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Trmt10cQ3UFY8 414 aaKnown RBP9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Q3UK37 420 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ipcef1Q5DU31 406 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Repin1Q5U4E2 545 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 PhgdhQ61753 533 aaKnown RBP9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Znf18Q810A1 556 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 LdahQ8BVA5 326 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Lmo3Q8BZL8 145 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Hdac7Q8C2B3 938 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 McmbpQ8R3C0 642 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gpsm2Q8VDU0 679 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Krcc1Q99JT5 256 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Cnot8Q9D8X5 292 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Rhobtb1Q9DAK3 695 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Gprc5dQ9JIL6 344 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Ing1Q9QXV3 279 aa9.9□□□□□ -0.82
Hmgb1-201ENSMUST00000085546 Smim17A0A504 109 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 4933406M09RikG3XA12 479 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Olfr1121L7MTT1 314 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cyp27b1O35084 507 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 MycP01108 439 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ifnb1P01575 182 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Slc10a3P21129 473 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Mgat1P27808 447 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gad2P48320 585 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Impdh1P50096 514 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Polr2iP60898 125 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Dab1P97318 588 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cry1P97784 606 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 4930502E18RikQ14BQ3 236 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Camk1dQ8BW96 385 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Lrrc19Q8BZT5 364 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 March11Q8CBH7 400 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Spag16Q8K450 639 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Plekhg6Q8R0J1 787 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Homer3Q99JP6 356 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 CatsperzQ9CQP8 194 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Snx7Q9CY18 387 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Echdc3Q9D7J9 300 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 EqtnQ9D9V2 337 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Znfx1Q8R151 1909 aaKnown RBP9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Greb1lB9EJV3 1913 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Zfp735B1ARH2 734 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ism2D3Z6A3 493 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Zbtb10E9Q8X5 861 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Obox5G3X9P6 291 aa9.89□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm8298J3QPI0 401 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms