RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 DcxO88809 366 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ubxn2bQ0KL01 331 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Emc10Q3TAS6 258 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Dmc1Q61880 340 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 WlsQ6DID7 541 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tnpo3Q6P2B1 923 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 CyldQ80TQ2 952 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Olfr784Q8VFZ9 319 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ino80bQ99PT3 375 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tbc1d15Q9CXF4 671 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Actrt1Q9D9J3 376 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ccdc97Q9DBT3 340 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm281D3Z1Y0 860 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 4930544D05RikJ3QK56 214 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tnfaip1O70479 316 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pou2f3P31362 431 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gpatch4Q3TFK5 415 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Zfp217Q3U0X6 1041 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Prickle1Q3U5C7 832 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Zfp868Q3UTQ6 422 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tcf4Q60722 670 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Egfl8Q6GUQ1 293 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Disc1Q811T9 852 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Aldh4a1Q8CHT0 562 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Rem2Q8VEL9 341 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 WwoxQ91WL8 414 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 NcaldQ91X97 193 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Grhl1Q921D9 618 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Lrp8Q924X6 996 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pbld2Q9CXN7 288 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Kat2bQ9JHD1 813 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Dmap1Q9JI44 468 aa10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Stau1Q9Z108 487 aaKnown RBP10.47□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Lzts3A2AHG0 700 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 PenkP22005 268 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Abcd2Q61285 741 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gja3Q64448 417 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Kcns3Q8BQZ8 491 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ldlrap1Q8C142 308 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pacs1Q8K212 961 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Chst12Q99LL3 419 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Decr1Q9CQ62 335 aaKnown RBP10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Trip4Q9QXN3 581 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm21293E9Q4G9 266 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 TyrobpO54885 114 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 BpgmP15327 259 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fgfr2P21803 821 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ythdf1P59326 559 aaKnown RBP10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Frg1P97376 258 aaKnown RBP10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cyp2c29Q64458 490 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Zdhhc19Q810M5 347 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Qsox1Q8BND5 748 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 AgpsQ8C0I1 645 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ston1Q8CDJ8 730 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Trim31Q8R0K2 507 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Slc30a5Q8R4H9 761 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mark1Q8VHJ5 795 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tfap2dQ91ZK0 452 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cstf3Q99LI7 717 aaKnown RBP10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Trpd52l3Q9CQ14 231 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Rin2Q9D684 903 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cyp2c55Q9D816 490 aa10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pak1ip1Q9DCE5 382 aaKnown RBP10.46□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm13941A2AJ38 245 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Pramef20B1ARV6 477 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fam47eD3YWC7 402 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gm10639E9Q6L7 222 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 1700122O11RikJ3QPW6 241 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ercc2O08811 760 aaKnown RBP10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gsta2P10648 222 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Psmb4P99026 264 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fam83hQ148V8 1209 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Serac1Q3U213 654 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Glp2rQ5IXF8 512 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Etaa1Q5SVT3 877 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Zrsr1Q64707 428 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Srd5a1Q68FF9 255 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Prpf18Q8BM39 342 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Dpy30Q99LT0 99 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Yaf2Q99LW6 179 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 4930524N10RikQ9D519 233 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Egfl7Q9QXT5 275 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 QkiQ9QYS9 341 aaKnown RBP10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Uts2Q9QZQ3 123 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Nphs1Q9QZS7 1256 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Spata31d1aE9QA35 1336 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gm5814J3QP80 125 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 RxrgP28705 463 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Hoxc13P50207 328 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rab10P61027 200 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Zyg11bQ3UFS0 744 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Trim67Q505D9 768 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cldn11Q60771 207 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Phlda1Q62392 405 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gpsm1Q6IR34 673 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 RragdQ7TT45 449 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gprc5aQ8BHL4 356 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ppp1r14cQ8R4S0 164 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Necab2Q91ZP9 389 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mrfap1Q9CQL7 125 aa10.46□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms